Macchiarini paper in Nature journal earns expression of concern for data questions

nature-communications-228x300Nature Communications has issued an expression of concern for a 2014 paper by beleaguered surgeon Paolo Macchiarini, citing concerns over whether the paper accurately reports the experiments that were carried out.

According to the notice, Macchiarini, a former rising star in the field of transplant medicine, agrees with the expression of concern. Three of his 22 co-authors have objected.

Experimental orthotopic transplantation of a tissue-engineered oesophagus in rats” describes transplanting an esophagus into rats that was seeded with their own stem cells, and notes that all animals survived the study period (14 days), and gained more weight than rats given a placebo operation. It’s a topic Macchiarini has made famous, as the first surgeon to perform a similar procedure with a human tracheal transplant. But he’s faced charges of misconduct in the last few years, resulting in his dismissal from Karolinska Institutet (KI).

Here’s the text of the notice, scheduled to go live at 10 a.m. UK time today: Continue reading Macchiarini paper in Nature journal earns expression of concern for data questions

Ecology journal flags carnivore paper under investigation

journal-of-applied-ecologyAn ecology journal has issued an expression of concern (EOC) for a recently published study, citing an institutional investigation about the data and conclusions.

According to the notice — issued by the Journal of Applied Ecology — the author’s institution in South Africa has received a report from an independent examiner. The editors are reviewing the paper — about reducing the impact of lethal carnivores such as black-backed jackals — “in light of this information.”

An official from the journal told us the investigation has to do with “relevant background information” that was not included in the study, published online in December.

Here’s the EOC, published earlier this month: Continue reading Ecology journal flags carnivore paper under investigation

Cell Press won’t retract papers despite one author confessing to fraud

Screen Shot 2016-08-03 at 18.54.35Cell Press journals will not be retracting two papers that were flagged with expressions of concern (EOCs) in April after one author claimed to have manipulated some experiments.

In a strange turn of events, as we previously reported, the study’s corresponding author refuted the claims of the author who confessed to fraud, citing concerns about his “motives and credibility.” Since then, two independent labs repeated the authors’ experiments, and “largely confirm” the central conclusions of a Cell paper, but were inconclusive regarding a paper in Molecular Cell. Regardless, in both cases, the journals have decided to take no further action. 

Both expressions of concern (and their associated editorial notes) will remain online, as part of the “permanent record,” a Cell Press spokesperson told us.

The spokesperson added more about the investigation process: Continue reading Cell Press won’t retract papers despite one author confessing to fraud

U Colorado’s former “golden boy” up to 7 retractions

University of Colorado DenverA former graduate student at the University of Colorado Denver has gained three retractions and two expressions of concern (EOC), following an institutional probe into his work. 

Last year, we reported on an investigation by the University of Colorado Denver into the research of Rajendra Kadam, which recommended retracting 10 papers. The report also flagged eight additional papers co-authored by Kadam whose data could not be validated, raising “concerns as to the scientific validity and integrity” of the material. A few months later, we reported on some of the notices — four retractions and an EOC — that had begun to appear for Kadam’s manuscripts.

We’ve since discovered more notices, bringing his total to seven retractions and three EOCs. 

Kadam was once a prominent member in the lab of Uday Kompella, and often referred to by colleagues as the “golden boy,” according to the institution’s report. In 2012, he won a graduate student symposium award from the American Association of Pharmaceutical Scientists.

A University of Colorado Denver spokesperson told Retraction Watch: Continue reading U Colorado’s former “golden boy” up to 7 retractions

Journal flags two papers by prominent diabetes researcher, more questioned on PubPeer

DiabetesDiabetes has issued two expressions of concern (EOCs) for papers co-authored by leading diabetes researcher Kathrin Maedler, adding to her previous count of one retraction and three corrections.

Both papers were questioned on PubPeer, alongside several others co-authored by Maedler, who is based at the University of Bremen in Germany. As we previously reported, PubPeer comments have led to one retraction for Maedler in the Journal of Biological Chemistry (JBC), and corrections in various other journals.

One of those corrections has now earned an EOC from Diabetes, which also extends to the original paper. Here are the notices, which asks the University of Bremen to investigate further:  Continue reading Journal flags two papers by prominent diabetes researcher, more questioned on PubPeer

PLOS ONE flags math paper over algorithm concerns

PLOS OnePLOS ONE has issued an expression of concern (EOC) for a 2014 math paper after readers raised concerns with its algorithm.

According to the first author of the paper Hafsa Athar Jafree from the University of Karachi in Pakistan — none of the authors agreed to the EOC notice. She told us the paper contains a few typos, which may have made it unclear to some readers, but said the authors had provided all of the necessary information to “justify the presented algorithms.”

A PLOS ONE spokesperson told us the journal decided to issue an EOC after consulting the editorial board, which raised significant concerns about the study.

In 2014, the journal issued a correction to the study to fix several equations in the original article. 

Here’s the EOC, posted July 25: Continue reading PLOS ONE flags math paper over algorithm concerns

Author pulls study for duplication, blames editing company

MedChemCommThe author of a paper about insulin has retracted it due to “extensive text and data overlap” with another paper.

In November 2015, MedChemComm issued an expression of concern (EOC) for the same paper. According to the EOC, the author of the paper, Yong Yang, flagged the paper to the journal, citing problems with authorship and portions of text overlap, which Yang attributed to an editing company.  

The editor-in-chief of the journal told us Yang’s institution — China Medical University — carried out an investigation into the case at the journal’s request.

We’ve also found a 2015 retraction for Yang, after he published a paper without the okay of his previous institution in Texas. 

Here’s the retraction notice: Continue reading Author pulls study for duplication, blames editing company

Researcher hired lawyers to try to get journal to run correction he wanted

BMCLogoWhen a researcher suspected a paper on fireflies had borrowed some of its methodology, he called lawyers to help him convince the publisher to craft a correction notice that was to his satisfaction.

Although the authors submitted a correction to BMC Plant Biology acknowledging Robert Birch as the original author of some material, as we reported previously, the publisher instead issued an expression of concern (EOC), noting that there was an “authorship dispute.”

When our post ran earlier this year, we didn’t know why a request for correction had turned into an EOC, which — as its name states — is typically more cause for concern than a correction. We’re still not sure exactly why, but we have learned that Birch disputed the content of the authors’ suggested correction, and hired lawyers to try to change the wording. From his perspective, there are several problems with the paper, he told us:

Continue reading Researcher hired lawyers to try to get journal to run correction he wanted

Controversial chemtrails paper flagged by journal

Frontiers in Public HealthA journal has published an expression of concern (EOC) for a 2016 paper providing evidence for a long-standing conspiracy theory about the dangers of cloud trails from jet planes.

A similar paper by the same author was retracted last year by another journal.

Both papers focused on the “chemtrails” emitted from jet planes, which conspiracy theorists have long believed contain toxic coal fly ash rather than harmless ice crystals, as the government claims. According to a press release about the 2016 paper, released by author J. Marvin Herndon, a geophysicist and “independent researcher” at the Transdyne Corporation in San Diego, California, the paper presents evidence the chemtrails contain coal fly ash, linked to a number of health problems.

But many people disagree with the findings — Jeffrey Beall, a librarian at the University of Colorado, Denver, criticized the paper on his blog.

Here’s the EOC, published today by Frontiers in Public Health: Continue reading Controversial chemtrails paper flagged by journal

Study warning of toxic leaks from Damien Hirst’s work may not be reliable, says author

via Flickr Commons
Damien Hirst’s “Away From The Flock” — exhibited at Tate Britain, via Flickr Commons

A study that found high levels of the carcinogen formaldehyde leaking from an exhibition by a prominent British artist may have unreliable data, according to its corresponding author.

The 2016 study about Damien Hirst’s exhibition at the Tate gallery in London in 2012 — which involved keeping dead animals in formaldehyde in glass cases — sparked concern in the mainstream media over the exhibition’s potential hazards to visitors.

But now the corresponding author of the paper —  Pier Giorgio Righetti of the Polytechnic University of Milan in Italy — has alerted the journal, Analytical Methods, of the paper’s shortcomings. The journal has issued an expression of concern (EOC), and is investigating.

Here’s the EOC, issued this week: Continue reading Study warning of toxic leaks from Damien Hirst’s work may not be reliable, says author