Data manipulation flushes paper on gut bacteria

cell reportsData manipulation in a Cell Reports paper blew the importance of a kind of bacteria out of proportion.

Retracted this month — less than three months after it was published — the paper showed, according to a summary on the cover page:

B. subtilis is a symbiont that resides in the gut of C. elegans and generates nitric oxide that is essential for the host. Xiao et al. demonstrate that nitric oxide promotes defense against pathogenic bacteria by activating p38 MAPK, demonstrating the importance of commensal bacteria in host immunity.

But B. subtilis — a member of the Bacillaceae family — aren’t actually as plentiful as they appeared, explains the retraction notice for “Gut-Colonizing Bacteria Promote C. elegans Innate Immunity by Producing Nitric Oxide:”

Continue reading Data manipulation flushes paper on gut bacteria

Biologists earn 5th retraction following Swedish investigation

plos pathA team of biologists have earned a fifth retraction for a paper containing manipulated images, following an investigation by the Swedish government.

Last year, the investigation found that former Uppsala University doctoral student Apiruck Watthanasurorot had manipulated figures in five papers, four of which have already been retracted. Earlier this year, we reported that his supervisor, last author Kenneth Söderhäll, had requested PLOS Pathogens simply correct the fifth paper because independent groups have confirmed the findings. But according to the retraction notice for “Bacteria-Induced Dscam Isoforms of the Crustacean, Pacifastacus leniusculus,” Söderhäll has since agreed to the retraction:

Continue reading Biologists earn 5th retraction following Swedish investigation

Cancer paper that doctored image from Science story earns retraction

lungcancercoverHere’s a joke for all you middle-schoolers out there. How are doctored images like bad pennies? They keep cropping up!

Here’s the latest one we’ve picked up: Lung Cancer has retracted a 2014 paper on the genetics of tumors after concluding the authors cribbed a figure that had appeared in a 2005 feature story in Science.

The paper, “ß-elemene against human lung cancer via up-regulation of P53 protein expression to promote the release of exosome,” drew attention on PubPeer last September from a reader who noticed striking similarities between one of the images the authors used and a figure in the Science piece (subscription required). According to the PubPeer commenter: Continue reading Cancer paper that doctored image from Science story earns retraction

Macchiarini did not obtain necessary ethics approvals, says Swedish Research Council

lancetSurgeon Paolo Macchiarini did not apply for the necessary ethics approval to perform the pioneering transplants he’s known for, according to the Swedish Research Council.

Chief Legal Counsel Anna Hörnlund, who wrote a letter in this week’s The Lancet, says Macchiarini’s work needed to obtain ethical approval from one of six regional ethical review boards, as required by Swedish law — and neither Macchiarini nor his former employer, Karolinska Institutet, did so:

Continue reading Macchiarini did not obtain necessary ethics approvals, says Swedish Research Council

Premature adaptation leads to withdrawal of sexual function paper

jsexmartherAhem.

The Journal of Sex & Marital Therapy has retracted a 2012 paper by a pair of authors in Spain who failed to obtain approval to adapt the model of sexual function they used in their study.

The article indicates that the work was based on previous research. But that declaration wasn’t enough to satisfy the creators of the model involved.

As the retraction notice states: Continue reading Premature adaptation leads to withdrawal of sexual function paper

Team in Japan earns third retraction for misconduct

JSRA team of researchers has earned its third retraction after an investigation at Oita University in Japan found instances of misconduct in their research.

The most recent notice mentions the investigation, and specifies that the first author, Satoshi Hagiwara, was responsible for the problematic figures in the paper. Hagiwara is also the first author on two retracted papers we reported on last year; one of the earlier retractions also mentions the investigation, but does not assign responsibility to any particular author. All three papers share three authors.

The retraction notice for “Continuous Hemodiafiltration Therapy Ameliorates LPS-Induced Systemic Inflammation in a Rat Model,” published in the Journal of Surgical Research, explains the issues with the paper:

Continue reading Team in Japan earns third retraction for misconduct

Paper linking fecal transplants to obesity in rats retracted for faked data

Diabetes Cover

A paper linking the fecal microbiome to obesity has been retracted after it became clear that one of the co-authors faked some of the data.

The 2014 paper in Diabetes — which found that rats given fecal transplants from obese mice were more likely to become obese themselves if given a particular diet — was pulled after after an institutional investigation found a co-author guilty of falsifying data underlying one figure and fabricating the data of two others.

Co-author Yassine Sakar — formerly based at the French National Institute of Agronomic Research (INRA) in Paris, France — was found responsible for the misconduct. But an official from the institution said that some responsibility must also be shared by the corresponding author Mihai Covosa, who has since resigned from the institution.

Here’s the retraction notice: Continue reading Paper linking fecal transplants to obesity in rats retracted for faked data

Research assistant fired for using student’s thesis in a paper

Reviews in Medical Microbiology

A research assistant at King Saud University (KSU) has lost his job after he used material from a student’s thesis without permission or attribution in a paper.

Lakshmana Krishnappa was terminated after a disciplinary committee considered his case last November, the vice dean for postgraduate training and research at KSU told Retraction Watch. In April of last year, Krishnappa retracted a paper published in January 2015 — we think that’s the date; the journal doesn’t make it all that clear — that included plagiarized material, published in Reviews in Medical Microbiology. He recently lost a second unrelated paper for duplication.

Here’s the retraction notice for the Reviews in Medical Microbiology paper, “Acinetobacter baumannii: pathogenecity, virulence factors and their correlation with adherence and invasion:”

Continue reading Research assistant fired for using student’s thesis in a paper

Biologist critiques own paper, journal retracts it — against her wishes

Evolution Cover ImageThe journal Evolution has retracted a 2007 paper about the roles of the different sexes in searching for mates, after the same author critiqued the work in a later paper. 

The case raises important questions about when retractions are appropriate, and whether they can have a chilling effect on scientific discourse. Although Hanna Kokko of the University of Zurich, Switzerland — who co-authored both papers — agreed that the academic literature needed to be corrected, she didn’t want to retract the earlier paper; the journal imposed that course of action, said Kokko

Let’s take a look at the retraction note: Continue reading Biologist critiques own paper, journal retracts it — against her wishes

The standard in transparency? Editor praises author honesty that led to retraction in anesthesia journal

a&Amay16

Sometimes, a junior member of the team sees things an editor-in-chief misses.

Regular readers know that we’re always delighted when we get a chance to commend researchers and journals for doing the right thing. Here’s an example that sets the standard.

Anesthesia & Analgesia (A&A) is retracting a 2015 paper which purportedly found important differences in patient outcomes based on the quality of their anesthesiologists. The trouble with the article: Continue reading The standard in transparency? Editor praises author honesty that led to retraction in anesthesia journal