Category: Plant biology

More than half of plant toxicity paper isn’t original, journal says

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Plagiarism and duplication can be deadly to a paper in any dose. In the case of a study on the toxicity of nanoparticles to plants, the publisher has presented the precise amount of plagiarism and duplications that ultimately felled the paper.

Specifically, according to Nanomaterials, 56% of “Potential Impact of Multi-Walled Carbon Nanotubes Exposure to the Seedling Stage of Selected Plant Species” was taken from other work.

Here are more details from the retraction notice, published last year:

Continue reading More than half of plant toxicity paper isn’t original, journal says

Beleaguered plant scientist with 22 corrections avoids 3 more

CellCell will not be issuing corrections for three papers co-authored by prominent plant biologist Olivier Voinnet, after readers on PubPeer raised questions about some of the images. 

The news may be a welcome relief for Voinnet, based at ETH Zurich in Switzerland, who has recently issued 22 corrections and seven retractions. Ongoing questions about his work have also earned him a three-year funding ban, and caused the European Molecular Biology Organization to revoke an award.

On July 28, Cell published editorial notes for all three papers, which have been collectively cited more than 1000 times (also reported by Leonid Schneider). The notes say that the journal will take “no further action,” noting that the authors of the papers informed Cell of the problems with figures, which do not appear to compromise the papers’ overall validity.  

Here’s the first editorial note, for a 1998 paper: Continue reading Beleaguered plant scientist with 22 corrections avoids 3 more

You’ve been dupe’d: Nice data — let’s see them again

As we’ve said before, with hundreds of retractions per year, there are simply too many for us to cover individually.

So from time to time we’ll compile a list of retractions that appeared relatively straightforward, just for record-keeping purposes.

Often, these seemingly straightforward retractions involve duplications, in which authors — accidentally or on purpose — republish their own work elsewhere.

Sometimes journals and authors blame this event on “poor communication,” our first example notes:

Continue reading You’ve been dupe’d: Nice data — let’s see them again

“Great shock and sadness:” Publishing gadfly to retract paper for duplication

untitledA vociferous advocate for correcting the literature — who has been banned by two publishers for his persistent communications — has asked journals to retract one paper and correct three others for duplications.

After a reader flagged his 2004 paper on PubPeer last month, author Jaime Teixeira da Silva “immediately” contacted the journal to alert it that the paper had been duplicated, as he noted on a recent comment on our site:

Continue reading “Great shock and sadness:” Publishing gadfly to retract paper for duplication

You’ve been dupe’d (again): Do these data look familiar? They are

plant_growth_regulationWe can’t keep up with the growing number of retraction notices, so we’ve compiled a list of recent duplications to update our records.

1. Authors don’t always intentionally duplicate their own work, of course. The first paper on our list was retracted after the authors included a figure from a previous paper by accident, according to the publisher: Continue reading You’ve been dupe’d (again): Do these data look familiar? They are

Botanist pair’s paper retracted, others questioned on PubPeer

Plant Science TodayA plant sciences journal has pulled a 2016 paper for manipulated images after the study came under question at PubPeer.

According to the notice, the authors claim that the images were supplied by a “service provider;” the editor-in-chief of the journal told us he doesn’t have any details on this third party’s identity.

The first author of the retracted paper in Plant Science Today — Dibyendu Talukdar, from the University of Calcutta in West Bengal, India — has several other papers being questioned on PubPeer. His co-author, Tulika Talukdar, who is based at Acharya Prafulla Chandra Roy Government College in West Bengal, India, according to her ResearchGate page, is a co-author on three of these papers. According to the present paper, however, Tulika Talukdar is affiliated with Raja Peary Mohan College, which is part of the University of Calcutta.

Here’s the retraction notice: Continue reading Botanist pair’s paper retracted, others questioned on PubPeer

Did an author retract a paper at company’s behest? Retraction notice says yes, author now says no

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The author of a paper whose retraction notice says it was pulled at the behest of a company now says that wasn’t the case.

It’s a bit difficult to get this story straight: Although the retraction notice says a company complained the 2006 paper was “giving business inputs to their competitors,” the corresponding author told us no one asked him to retract the paper. Instead, he said, he was concerned about the inclusion of plant materials that belong to a previous employer, and did a “poor job” of explaining the reason for retraction. But since the results of the paper remain valid, Santosh Rajput — now a plant breeder at Dryland Genetics LLC in Ames, Iowa — told us he regrets asking to retract it:

Continue reading Did an author retract a paper at company’s behest? Retraction notice says yes, author now says no

“We were completely shocked:” Plant biologists issue mega-correction

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Plant biologists have issued a major correction (what we dub “mega“) after realizing a significant mistake in their experiment.

The 2014 paper shows that a protein known as RAP plays a key role in chloroplast biogenesis. But as Ludwig Maximilians University-based authors Alexandra-Viola Bohne and Laura Kleinknecht continued to do their research, they found an error in the design of primers they used to synthesize the RNA for their experiments — and told us they are concerned other researchers could run into the same problem.

Although the authors considered retracting the paper, since its main conclusion was unaffected, they issued a correction notice, published in April in Plant Cell:

Continue reading “We were completely shocked:” Plant biologists issue mega-correction

Genotyping mistake costs lab two papers and year of work

PNASResearchers are retracting two papers about molecular signalling in plants — including one from the Proceedings of the National Academy of Sciences (PNAS) — after discovering some inadvertent genotyping errors. But that was only after they used the problematic plants for an entire year without realizing they’d made a mistake.

In a pair of refreshingly transparent and detailed notices, the authors explain that the transgenic plants used in the papers included genotyping errors, which invalidated their findings. According to the notices, first author Man-Ho Oh generated the problematic transgenic plants, while corresponding author Steven C. Huber, based at University of Illinois, Urbana-Champaign (UIUC), took responsibility for omitting some critical oversight.

Huber told us that there were only two papers that used the transgenic plants in question, so no other retractions will be forthcoming.

Here’s the notice in PNAS for “Autophosphorylation of Tyr-610 in the receptor kinase BAK1 plays a role in brassinosteroid signaling and basal defense gene expression:”  Continue reading Genotyping mistake costs lab two papers and year of work

Journal flags paper over allegations it used competitors’ text, plasmids

MGGA journal has issued an expression of concern (EOC) for a paper on a common crop virus after the authors were accused of using competitors’ unpublished text and plasmids.

Investigations by the journal and the involved institutions — the University of the Witwatersrand in South Africa, where the paper’s authors are based, and North Carolina State University (presumably, where the accusing group is from) — were inconclusive, the notice states.

So the editor flagged “Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection” with an EOC:

Continue reading Journal flags paper over allegations it used competitors’ text, plasmids