Cancer Cell paper under investigation following anonymous queries on PubPeer

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A Cancer Cell paper that caused a flurry of activity on the website PubPeer is under investigation, after the last author announced on the site that he’d requested a correction from the journal.

The 2012 paper sparked a lively dialogue last month on the post-publication discussion site, as commenters questioned Western blot images in which some bands appeared to be duplicates. The last author responded, noting he had alerted the journal to a “mishap,” and a correction would be forthcoming. However, some commenters remained unsatisfied, and questioned why the correction was taking so long to appear, as well as the explanation for what went wrong.

A spokesman from Cancer Cell confirmed to us the paper is under investigation:

Continue reading Cancer Cell paper under investigation following anonymous queries on PubPeer

Misidentified DNA leads authors to retract zebrafish cholesterol paper

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Authors are retracting a 2012 paper on cholesterol metabolism in zebrafish after realizing it included a case of mistaken identity in a DNA sequence crucial to some aspects of the experiment.  

A postdoc misidentified the plasmid in question after failing to fully sequence it before including it in the experiment. A technician in the lab found the mistake, last author Steven Farber, a researcher at the Carnegie Institution for Science in Maryland, explained:

When the omitted region was correctly sequenced we discovered it had an error.

He told us in a phone interview what that felt like:

We were like, holy crap.

Next came months of back and forth with the journal, discussing whether to correct or retract the paper. Farber tells us the mistake, which affects two figures,

was unfortunate. Most of the paper is in fact correct.

The paper, “Visualization of Lipid Metabolism in the Zebrafish Intestine Reveals a Relationship between NPC1L1-Mediated Cholesterol Uptake and Dietary Fatty Acid,” published in Chemistry & Biology, has been cited 21 times, according to Thomson Scientific’s Web of Knowledge.

Here’s the detailed retraction noteContinue reading Misidentified DNA leads authors to retract zebrafish cholesterol paper

Singapore investigation leads to two retractions, two more on the way

cov150hAuthors have retracted papers from Cell Metabolism and the Journal of Biological Chemistry after an investigation in Singapore found issues, including falsified data. The investigation is ongoing, and two additional retractions, along with two corrections, are on the horizon.

The investigation looked into papers by first authors Sudarsanareddy Lokireddy, now a postdoc at Harvard, and Sandhya Sriram, a postdoc at the Agency for Science, Technology and Research in Singapore. Led by the Nanyang Technological University in Singapore, where some of the work was done, the investigation concluded that there were issues with six papers on which either Sriram or Lokireddy was first author.

All authors but Lokireddy have agreed to retractions or corrections. Ravi Kambadur of NTU, and Mridula Sharma at the National University of Singapore, are the last two authors on all the papers.

According to a notice from the NTU, the “investigation found a number of instances of alterations to data” in three papers on which Lokireddy is first author. One of those was retracted December 1 by Cell Metabolism: Continue reading Singapore investigation leads to two retractions, two more on the way

Cancer researcher contributed “false data” to 11 studies

ori-logoA former cancer researcher has falsified data in 11 studies, according to the results of a investigation scheduled to be published in the Federal Register tomorrow.

The Office of Research Integrity’s findings are based on an inquiry at Virginia Commonwealth University, where Girija Dasmahapatra worked until July of this year, investigating possible therapies for cancer. The misconduct affected research funded by three grants from the National Institutes of Health. Steven Grant, a researcher at VCU, is the principal investigator on the grants, each of which total over $2 million in funding. All of the 11 affected papers will be corrected or retracted, according to the ORI notice.

Two of the papers containing “falsified and/or fabricated” data — a study on an experimental combination of drugs for blood cancer and one on chemotherapies for rare forms of lymphoma  — were covered in press releases by VCU.

According to the notice in the Federal Register:

Continue reading Cancer researcher contributed “false data” to 11 studies

Journal repels a paper on a magnetic material after authorship, funding issues

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A paper on the properties of a magnetic material is being retracted after including an author without his permission, and omitting a funding source.

According to the note, the work was done in Miao Yu‘s lab at Chongqing University in China; the authors then added Yu’s name to the paper without his authorization, and neglected to list a relevant funding source.

Here’s the retraction note for “Temperature-dependent dynamic mechanical properties of magnetorheological elastomers under magnetic field,” published in the Journal of Magnetism and Magnetic Materials:

Continue reading Journal repels a paper on a magnetic material after authorship, funding issues

Duplication shatters two photonic crystal papers

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Two journals published by Elsevier are retracting a pair of material science papers that appear to share figures.

The papers  — in Materials Letters and Optics Communications — discuss photonic crystals, a kind of material used to manipulate light. They share the same first author, Zheng-qi Liu at Jiangxi Normal University and  Nanjing University in China, as well as six other authors. Each paper presents one of the duplicated figures as a slightly different material.

One of the duplicated figures is a a picture of a photonic crystal taken with a scanning electron microscope that gives detail at the level of a few micrometers (it looks like a honeycomb, but it’s composed of tiny spheres). It’s Figure 1a in both papers:

Continue reading Duplication shatters two photonic crystal papers

Investigation finds data issues polluted air quality paper

1-s2.0-S0013935113X0009X-cov150hAn investigation at the Queensland University of Technology in Australia has found that a paper on air pollution and human health contains a host of issues with the data and its analysis. The paper has been retracted with a very detailed note from Environmental Research.

The issues with the paper include an “incorrect analysis of the data,” and its failure to properly cite multiple papers and one researcher’s contributions. Ultimately, according to the retraction note, the investigation found that the “conclusions of the paper are flawed.”

“Submicrometer particles and their effects on the association between air temperature and mortality in Brisbane, Australia” has been cited three times, according to Thomson Scientific’s Web of Knowledge.

The retraction note is very, very detailed. It outlines the problems with the paper:

Continue reading Investigation finds data issues polluted air quality paper

Honest errors take down math paper

1-s2.0-S0022247X15X00217-cov150hAn incorrect proof has felled a math paper. There’s not too much to say in a straightforward situation like this one, which we’ve seen before — the result of honest errors, not any malfeasance.

Here’s the abstract for “Spectral mapping theorem for generalized Kato spectrum:”

In this paper, we give an affirmative answer to Mbekhta’s conjecture (Mbekhta, 1990) about the pseudo Fredholm operators in Hilbert space. As a consequence, we characterize pseudo Fredholm operators and we prove that the generalized Kato spectrum satisfies the spectral mapping theorem in the Hilbert spaces setting.

The paper — published in the Journal of Mathematical Analysis and Applications — has been cited twice, according to Thomson Scientific’s Web of Knowledge.

Here’s the retraction note:

Continue reading Honest errors take down math paper

“Significant errors in the data” stop Hurricane Isaac paper

1-s2.0-S0169809515X0010X-cov150hThis version of Hurricane Isaac — based on the force of nature that hit Louisiana in 2012 —  didn’t get very far. Atmospheric Research has retracted a paper on a simulation of the hurricane just a few months after it was published.

The paper included two features that commonly get a paper retracted: erroneous data, and a dispute over authorship.

The 2014 paper only has one author: O. Alizadeh-Choobari, a climatologist at the University of Tehran.

Here’s the retraction note, which provides a few more details on what went wrong:

Continue reading “Significant errors in the data” stop Hurricane Isaac paper

Heart researcher gets 3rd retraction for copying images of rat hearts

1-s2.0-S0014299914X00233-cov150hWhen two papers include the same images of rat hearts, one of those papers gets retracted.

The papers share a corresponding author, Zhi-Qing Zhao of Mercer University School of Medicine in Savannah, Georgia. This marks his third retraction; we reported on two others earlier this year.

The papers examine the effect of curcumin, which has antinflammatory properties (in addition to giving the spice turmeric its yellow color). The retracted paper, “Dual ACE-inhibition and angiotensin II AT1 receptor antagonism with curcumin attenuate maladaptive cardiac repair and improve ventricular systolic function after myocardial infarctionin rat heart,” was published in the January 5, 2015 issue of the European Journal of Pharmacology, and has zero citations, according to Thomson Scientific’s Web of Knowledge. It shares multiple figures with another 2012 paper, “Curcumin promotes cardiac repair and ameliorates cardiac dysfunction following myocardial infarction,” published in the British Journal of Pharmacology, which has not been retracted. The BJP paper has been cited 18 times.

Here’s the retraction note for the EJP paper:

Continue reading Heart researcher gets 3rd retraction for copying images of rat hearts