Widely used brain tumor cell line may not be what researchers thought it was

Bengt Westermark
Bengt Westermark

Nearly 50 years ago, researchers in Uppsala, Sweden used cells from a patient to establish a brain tumor cell line that has become widely used. But a new study suggests that the most common source of that cell line used by scientists today may not be derived from that original patient’s tumor, raising questions about the results obtained in hundreds of studies.

In a new paper out today in Science Translational Medicine, Bengt Westermark, of Uppsala University, and colleagues describe what they found when they performed a forensic DNA analysis comparing the widely used version of the cell line to the original. The findings are consistent with those of other analyses in which cell lines turn out not to be what researchers thought, a problem we’ve focused some attention on.

Here’s an email interview with Westermark about the findings and their implications: Continue reading Widely used brain tumor cell line may not be what researchers thought it was

High-profile Science paper on fish and plastics may earn notice of concern

science mag coverScience is considering adding an expression of concern (EOC) to a June paper that caught the media’s attention for showing how human pollution may be harming fish, following allegations of research misconduct.

A group of researchers allege the paper — which suggested fish larvae are eating small particles of plastic rather than their natural prey — contains missing data and used a problematic methodology. After the researchers submitted a formal letter (available here), Uppsala University in Sweden is now conducting an inquiry, the first step in determining whether to launch a formal investigation.

A spokesperson from Science told Retraction Watch that once the journal independently verifies that an investigation is underway, it will issue an EOC for the paper: Continue reading High-profile Science paper on fish and plastics may earn notice of concern

You’ve been dupe’d: Nice data — let’s see them again

As we’ve said before, with hundreds of retractions per year, there are simply too many for us to cover individually.

So from time to time we’ll compile a list of retractions that appeared relatively straightforward, just for record-keeping purposes.

Often, these seemingly straightforward retractions involve duplications, in which authors — accidentally or on purpose — republish their own work elsewhere.

Sometimes journals and authors blame this event on “poor communication,” our first example notes:

Continue reading You’ve been dupe’d: Nice data — let’s see them again

Is the bulk of fMRI data questionable?

Anders Eklund
Anders Eklund, via Linköping University

Last week, a study brought into question years of research conducted using the neuroimaging technique functional magnetic resonance imaging (fMRI). The new paper, published in PNAS, particularly raised eyebrows for suggesting that the rates of false positives in studies using fMRI could be up to 70%, which may affect many of the approximately 40,000 studies in academic literature that have so far used the technique. We spoke to the Anders Eklund, from Linköping University in Sweden, who was the first author of the study. Continue reading Is the bulk of fMRI data questionable?

Biologist under investigation asks journal to swap image, journal retracts the paper

Suchitra Sumitran-Holgersson, via the University of Gothenburg
Suchitra Sumitran-Holgersson, via the University of Gothenburg

When a researcher discovered one of the images in her papers was a duplication, she asked the journal to fix it — but the journal decided to retract the paper entirely.

The researcher, Suchitra Sumitran-Holgersson, is currently being investigated by the University of Gothenburg in Sweden after a number of her papers were questioned on PubPeer. She told us the duplication was the result of ‘‘genuine human error.’’ Tissue Engineering Part A, however, decided the request to swap the image was a ‘‘cause for concern,’’ and chose to retract the paper. 

Here’s the retraction notice:

Continue reading Biologist under investigation asks journal to swap image, journal retracts the paper

Biologists earn 5th retraction following Swedish investigation

plos pathA team of biologists have earned a fifth retraction for a paper containing manipulated images, following an investigation by the Swedish government.

Last year, the investigation found that former Uppsala University doctoral student Apiruck Watthanasurorot had manipulated figures in five papers, four of which have already been retracted. Earlier this year, we reported that his supervisor, last author Kenneth Söderhäll, had requested PLOS Pathogens simply correct the fifth paper because independent groups have confirmed the findings. But according to the retraction notice for “Bacteria-Induced Dscam Isoforms of the Crustacean, Pacifastacus leniusculus,” Söderhäll has since agreed to the retraction:

Continue reading Biologists earn 5th retraction following Swedish investigation

Macchiarini did not obtain necessary ethics approvals, says Swedish Research Council

lancetSurgeon Paolo Macchiarini did not apply for the necessary ethics approval to perform the pioneering transplants he’s known for, according to the Swedish Research Council.

Chief Legal Counsel Anna Hörnlund, who wrote a letter in this week’s The Lancet, says Macchiarini’s work needed to obtain ethical approval from one of six regional ethical review boards, as required by Swedish law — and neither Macchiarini nor his former employer, Karolinska Institutet, did so:

Continue reading Macchiarini did not obtain necessary ethics approvals, says Swedish Research Council

Lancet issues expression of concern for 2011 Macchiarini paper

Paolo Macchiarini
Paolo Macchiarini

The Lancet has tagged an expression of concern onto a seminal 2011 paper by Paolo Macchiarini, the Italian surgeon whose work and conduct outside the operating room has earned months of  heavy criticism that recently culminated in his dismissal from the Karolinska Institutet.

Tracheobronchial transplantation with a stem-cell-seeded bioartificial nanocomposite: a proof-of-concept study,” which described the first case of a transplant using an artificial trachea seeded with the patient’s own stem cells, now bears an expression of concern from The Lancet editors, citing ongoing investigations. The journal has also removed three more authors from the paper, upon their request.

The expression of concern essentially presents the timeline of the controversy that led the journal to make this move:

Continue reading Lancet issues expression of concern for 2011 Macchiarini paper

Biologist’s research under investigation in Sweden after being questioned on PubPeer

Holgersson
Suchitra Sumitran-Holgersson

The University of Gothenburg in Sweden is investigating several papers co-authored by biologist Suchitra Sumitran-Holgersson after they were challenged on PubPeer.

Sumitran-Holgersson already has one retraction under her belt — of a 2005 Blood paper, after another investigation concluded the results “cannot be considered reliable.” Sumitran-Holgersson and her husband, co-author Jan Holgersson, did not sign the retraction notice. Both were based at the Karolinska Institutet (KI) at the time, but have since moved to the University of Gothenburg.

Now, the University of Gothenburg has launched its own investigation of the papers questioned on PubPeer, according to Continue reading Biologist’s research under investigation in Sweden after being questioned on PubPeer

Macchiarini dismissed from Karolinska

Paolo Macchiarini
Paolo Macchiarini

The Karolinska Institutet has dismissed former rising star surgeon Paolo Macchiarini from his post, effective immediately.

A KI news release, dated today, states:

The Staff Disciplinary Board at Karolinska Institutet has today decided to relieve Paolo Macchiarini of his duties as a researcher at KI. He is to be informed immediately that his contract has been rescinded.

For a refresher on the story, check out our constantly updating timeline. As a brief recap: Continue reading Macchiarini dismissed from Karolinska