Another “first author has accepted responsibility” retraction from immunity journal

IAIScientists have pulled their 2013 Infection and Immunity paper after a reader noticed duplicated data in three figures, and the first author was “unable to provide the original data used to construct the figures,” according to the journal’s editor-in-chief.

According to the retraction note, “the first author has accepted responsibility for these anomalies” — similar to another recent retraction from the same journal, also due to image duplication reported by a reader (apparently the journal has one or more careful readers).

The paper, “Pseudomonas aeruginosa Outer Membrane Vesicles Modulate Host Immune Responses by Targeting the Toll-Like Receptor 4 Signaling Pathway,” concerns the role of outer membrane vesicles excreted by the bacteria to incite an inflammatory response in mice. It was written by authors at the University of North Dakota, Sichuan University in China, and the University of Chicago, and has been cited six times, according to Thomson Scientific’s Web of Knowledge.

Here’s the complete retraction note:

Continue reading Another “first author has accepted responsibility” retraction from immunity journal

“A decision of misconduct was reached”: Two lung papers expire

JofAnesthTwo papers about the molecular underpinnings of lung damage are being retracted following an investigation at Oita University in Japan, which revealed that images from both papers had been used to depict “different experimental conditions” in a third paper (which has not been retracted).

It’s not clear which of the authors were the subject of the investigation. The two retracted papers, “Nafamostat mesilate inhibits the expression of HMGB1 in lipopolysaccharide-induced acute lung injury” in the Journal of Anesthesia and “Coexpression of HSP47 Gene and Type I and Type III Collagen Genes in LPS-Induced Pulmonary Fibrosis in Rats” in Lung, both originally published in 2007, share the same first author — Satoshi Hagiwara, whose affiliation is listed as the Department of Brain and Nerve Science, Anesthesiology, Oita University Faculty of Medicine. The papers have been cited 13 times and 12 times, respectively, according to Thomson Scientific’s Web of Knowledge. Hagiwara is also the first author on the third paper that contains the duplicated images.

The first retraction notice reads:

Continue reading “A decision of misconduct was reached”: Two lung papers expire

More “unsubstantiated conclusions” partially sink another origin of life paper

OrigLife_ak17A trio of researchers based in Russia is asking to pull another set of figures and a table from a 2008 paper on modeling ATP formation after an investigation found the fourth researcher – the first author on the paper — “falsified or fabricated” the data they reflect.

The paper, in Origins of Life and Evolution of Biospheres, is the second partial retraction from many of the same authors for the same reason. Both journals also issued erratum notices, which read quite similarly. Here’s the latest note:

Continue reading More “unsubstantiated conclusions” partially sink another origin of life paper

Article on suicide in Egypt retracted for double publication

JForensicSci_ak9A 2012 article published in the Journal of Forensic Sciences is being retracted because of an “overlap with a previous publication by the same authors.”

The corresponding author, Heba Yassa, a lecturer at Assiut University in Egypt, readily explained in an email exchange that the mix-up was due to a miscommunication with the editor of another journal, which she believed was not going to publish the article. “I know accidentally that the editor…published the article.”

The article, which examined suicides in one of the largest provinces in Egypt between 2005 and 2009, found rates had gone up since 1987, and men tended to use more violent methods than women.

Here’s the retraction notice: Continue reading Article on suicide in Egypt retracted for double publication

We’ll tell you later, says ophthalmology journal about retracted paper

EurOpthRevThe European Ophthalmic Review has retracted a 2014 article about the macular degeneration drug aflibercept without any explanation.

Here’s the retraction notice, such as it is:

Continue reading We’ll tell you later, says ophthalmology journal about retracted paper

Cell Press investigating possible image manipulation in influential yeast genetics paper

cellCell Press is looking into anonymous allegations that a pair of influential papers on gene activation in yeast may contain more than two dozen instances of image manipulation, according to a spokesperson for the journal.

The accusations first appeared in March on PubPeer, where they triggered a small avalanche of comments, including one asserting “unambiguous and repeated examples of data re-use.”

The concerns raised on PubPeer have even sparked an investigation by an institution in Spain, which found no evidence to support the allegations. But not everyone agrees with that verdict.

Continue reading Cell Press investigating possible image manipulation in influential yeast genetics paper

Flood paper washed away after “oversight” leads to publication of wrong manuscript

JEHSEThe editor of the Journal of Environmental Health Science and Engineering has retracted a paper mapping flood zones in Iran because the authors mistakenly uploaded a manuscript that had already been published elsewhere.

According to corresponding author Majid Bagheri of K.N. Toosi University of Technology in Tehran, a different paper on wastewater treatment was accepted and peer-reviewed at JEHSE, but then the authors uploaded the wrong manuscript, and that manuscript, on flood zones, made it all the way through acceptance and publication due to an “oversight.”

The retracted version of the paper was published online on December 27, 2014 in JEHSE, a BioMed Central title. The preceding, non-retracted version, was published online at the Arabian Journal for Science and Engineering just four days earlier, on December 23, 2014.

Here is Bagheri’s account: Continue reading Flood paper washed away after “oversight” leads to publication of wrong manuscript

Asphalt paper paved over for allegedly plagiarizing a student’s thesis

PSTThe publishers of the journal Petroleum Science and Technology have retracted a paper because one of the authors “did not agree to co-author this manuscript,” and did not even communicate with the other three authors.

According to one involved party, the problem is bigger than just lack of communication: The paper, “Fatigue and Low Temperature Fracture in Bitumen Mastic,” authored by a dean of civil engineering in Iran, was “copied word for word” from a Canadian student’s master thesis, according to the student’s advisor.

Three of the authors on the paper are engineers at the Shahid Rajaee Teacher Training University in Tehran, Iran, including the dean of civil engineering, Saeed Ghaffarpour Jahromi. The fourth author, B. J. Smith, is listed as a member of the Department of Chemistry at Queen’s University in Kingston, Ontario.

Continue reading Asphalt paper paved over for allegedly plagiarizing a student’s thesis

“[T]hese things can happen in every lab:” Mutant plant paper uprooted after authors correct their own findings

FrontiersThree biologists at Tokyo Gakugei University in Japan have retracted a 2014 Frontiers in Plant Science paper on abnormal root growth in Arabidopsis “in light of new experimental evidence” showing they fingered the wrong mutant gene. The journal editors are hailing the retraction as an “excellent example of self-correction of the scientific record.”

The paper, “Mechanosensitive channel candidate MCA2 is involved in touch-induced root responses in Arabidopsis,” described the abnormally behaving roots of a mca2-null mutant Arabidopsis plant.

A subsequent string of experiments by the same research team—including DNA microarrays, RT-PCR, and a PCR-based genomic deletion analysis—demonstrated that two other mutations that somehow creeped into their experimental populations may have been to blame for the abnormal root behavior.

It’s a notably thorough and informative retraction notice from Frontiers, an open-access publisher with a history of badly handled and controversial retractions and publishing decisions. The notice describes the new experiments and the previous, erroneous results: Continue reading “[T]hese things can happen in every lab:” Mutant plant paper uprooted after authors correct their own findings

Sub-optimal: Industrial optimization paper crushed by author’s “serious error of judgment”

chemo intell lab systemsChemometrics and Intelligent Laboratory Systems, an Elsevier publication, has retracted a 2014 paper by researchers in China and the United Kingdom for data misuse and authorship issues.

The article, “Optimization of fluidized bed spray granulation process based on a multiphase hybrid model,” was purportedly written by Dapeng Niu, of the College of Information Science and Engineering at Northeastern University, in Shenyang, China, Ming Li, of De Montfort University, in Leicester, England, and Fuli Wang, a vice-president at Northeastern.

But Niu apparently didn’t perform any experiments, lifted the data from other sources, and published the paper without his co-authors’ okay.

Here’s more from the retraction notice: Continue reading Sub-optimal: Industrial optimization paper crushed by author’s “serious error of judgment”