After journal retracts their paper, authors post rebuttal on arXiv

In July 2017, just days after accepting and publishing a paper, a physics journal discovered several scientific errors” and decided to retract it.

But the authorsAlexander Kholmetskii and Tolga Yarman—strongly objected to the journal’s decision, so much so they published a detailed rebuttal to the retraction on the preprint server arXiv.

The paper explores a new principle related to Einstein’s theory of relativity. According to the authors, after the Canadian Journal of Physics notified them on July 17 about the decision to retract the paper, they asked the editor to publish their objection “to defend our sound point of view, and beyond this, our scientific reputation.” But Kholmetskiiwho lists his affiliation at Belarus State University in Minsk, and Yarman, a professor at Okan University in Istanbul—told us that the editor found their response “inappropriate.” As a result, the authors turned to aiXiv to protest the retraction.

Here’s the retraction notice for “Conservative relativity principle and energy-momentum conservation in a superimposed gravitational and electric field:” Continue reading After journal retracts their paper, authors post rebuttal on arXiv

Researcher apologizes for ignoring early warnings about earthquake data

In 2016, three researchers published data they had collected on a series of devastating earthquakes that hit Japan earlier that year.

But, in late September 2017, one of the authors—Hiroyuki Goto—revealed that the Kumamoto Earthquake data contained “wide reaching errors”—and an outside expert had warned him the data might be problematic nine months earlier.  

Goto, an associate professor in the Disaster Prevention Research Institute at Kyoto University, issued two statements in which he acknowledged the errors, but did not indicate how they occurred. According to The Japan Times, Japan’s Ministry of Education, Culture, Sports, Science and Technology is investigating whether the data “was falsified or fabricated due to inconsistencies with other readings taken nearby.” A report in another Japanese paper, The Mainichi, notes that Osaka University—where one of the authors, Yoshiya Hata, works—is looking into the matter as well.

Continue reading Researcher apologizes for ignoring early warnings about earthquake data

21 faculty at Johns Hopkins threaten to resign from board if journal doesn’t retract paper

More than 20 faculty members at Johns Hopkins University have signed a letter to Scientific Reports saying they will resign from the editorial board if the journal doesn’t retract a 2016 paper.

The paper is problematic, they argue, because a biologist at Johns Hopkins claims it plagiarized his work. One of that biologist’s colleagues at Hopkins has already resigned from the journal’s editorial board over its decision to correct (and not retract) the paper; last week, another 21 people told the journal they’d do the same.

The letter to the journal also includes a side-by-side comparison between the 2016 paper and the work it allegedly plagiarized. The board members note:

Continue reading 21 faculty at Johns Hopkins threaten to resign from board if journal doesn’t retract paper

“The results are essentially meaningless:” Typos, missing variables found throughout physics paper

A physics journal has retracted a 2014 paper after a reader discovered a slew of errors.

The paper, published in the Journal of Thermophysics and Heat Transfer, explored how the properties of nanofluidsfluids that contain nanoparticles—change as the fluid moves through different materials.  

According to the editor-in-chief, Greg Naterer, an outside expertAsterios Pantokratoras, based at Democritus University of Thrace in Greececontacted the journal in May 2017 after discovering “errors with symbols in equations and figures.” The journal investigated the concerns and reached out to the paper’s corresponding author V. Ramachandra Prasad at Madanapalle Institute of Technology and Science in India for a response; after several rounds of comments from Pantokratoras and Prasad, the journal concluded that the paper should be retracted.

Naterer explained: Continue reading “The results are essentially meaningless:” Typos, missing variables found throughout physics paper

Board member resigns from journal over handling of paper accused of plagiarism

A biologist is crying foul at a journal’s decision to correct (and not retract) a paper he claims plagiarized his work — and one of his colleagues has resigned from the journal’s editorial board as a result.

The 2016 paper, published by Scientific Reports, is an application of a previously published algorithm designed to better identify regulatory sequences in DNA. The three authors, based at the Shenzhen campus of the Harbin Institute of Technology, used the technique to identify recombination spots in DNA. They called it SVM-gkm.

On April 2, Michael Beer of Johns Hopkins University in Baltimore notified the editors of Scientific Reports that he believed the paper had plagiarized his work. Despite Beer’s efforts, the journal ultimately decided to issue a correction notice, which cites “errors” and the authors’ failure to credit Beer’s work. That isn’t good enough for Beer — nor one of his colleagues at Johns Hopkins, who resigned from the journal’s editorial board saying “the recent affair with Mike Beer’s work being plagiarized did not impress me.

Continue reading Board member resigns from journal over handling of paper accused of plagiarism

Researcher discovers paper published by co-author in another journal

In February 2016, Albert Jambon received some puzzling news.

Several colleagues had alerted him to a paper, published online in late December 2015 in the Journal of African Earth Sciences (JAES), reporting the discovery of a rare mineral, which Jambon had been analyzing.

When Jambon read the paper, he realized it was a modified version of a paper he had been working on for almost eight years. Impatient, one of his co-authors, Ahmad Bilal, had published his own version of the manuscript and listed himself as the sole author.

Jambon, a professor at Pierre and Marie Curie University, believes that Bilal’s paper plagiarized his manuscript, but Bilal disputes this allegation. Bilal–who works at Damascus University in Syria–says he couldn’t wait any longer to publish the manuscript, so wrote “a completely new version.” Since the authors couldn’t resolve the authorship dispute, in August 2016, the journal issued a “temporary” expression of concern, alerting readers to the authorship concerns. Now, a year and a half later, a spokesperson for the publisher says it’s going to be retracted.

Eight years is a long time to work on a paper.

Continue reading Researcher discovers paper published by co-author in another journal

“Devastating:” Authors retract paper in Nature journal upon discovering error

Several years ago, Chris Dames thought he had made an exciting discovery, a “secret sauce” that would allow him to design a device using a novel mechanism.

In a 2014 Nature Communications paper, Dames—who works at the University of California at Berkeley—and his team described the first experimental results for the device, a photon thermal diode. A thermal diode conducts heat in one direction but not in the other, and in theory, could have broad applications—for example, provide barriers that shield buildings from excess heat or use heat to power computers.

But two years later, in August 2016, a colleague thought he had discovered a fundamental error in the design of the experiments. Bair Budaev, who also works at the University of California at Berkeley, believed that the authors made a “a fundamental symmetry error” which invalidated their results. Continue reading “Devastating:” Authors retract paper in Nature journal upon discovering error

Post-publication peer review in action: Science flags paper just days after publication

Science has issued an expression of concern for a widely covered materials science paper published on Friday, citing issues with the supplementary data.

The paper — which caught the attention of multiple news outlets — added properties to cotton fibers in vitro, potentially enabling researchers to manufacture fabric that can fluoresce or carry magnetic properties.

The move to issue an expression of concern was unusually quick. According to the journal, an expert who received the paper from a journalist under a media embargo contacted Science to flag issues in some of the supplementary data. At the time of this post, the paper does not yet have an entry on PubPeer.

Here’s the full expression of concern:

Continue reading Post-publication peer review in action: Science flags paper just days after publication

Chem journal cautions readers about data in three papers

A chemistry journal has issued expressions of concern for three papers after a reader notified the editors of “unexplained discrepancies” in the data.

According to the notices, after the editors of Organic & Biomolecular Chemistry confirmed the problems, they contacted the corresponding author on the three papers, Pradeep Kumar—who works at the Council of Scientific and Industrial Research (CSIR)-National Chemical Laboratory in Pune, India—as well as the director of CSIR, Ashwini Kumar Nangia. The institution conducted its own internal review of the spectra and concluded the authors did not intentionally alter them.

Still, the journal and institution could not confirm the accuracy of the data, and the journal published expressions of concern to warn readers about the issues.

Here’s the expression of concern for “A general and concise asymmetric synthesis of sphingosine, safingol and phytosphingosines via tethered aminohydroxylation:”

Continue reading Chem journal cautions readers about data in three papers

Chemistry journal issues correction longer than original paper

A 2011 chemistry paper required corrections so extensive that the author published the changes as a second, longer paper.

Both papers, published in the Chinese Journal of Chemistry, described the synthesis of a protein molecule with potential therapeutic applications in cancer. But when the paper’s corresponding author Yikang Wu tried to continue the work, he discovered that a substantial part of the 2011 study was incorrect.

The original paper is not marked with any editor’s note, even though the new paper — which is three pages longer than the 2011 version — acknowledges it is a “partial retraction/correction of previous results.” The new paper does appear in the list of “related content” for the 2011 article.

Given the errors, in the 2017 paper, Wu and his co-authors write: Continue reading Chemistry journal issues correction longer than original paper