When editors confuse direct criticism with being impolite, science loses

Jasmine Jamshidi-Naeini

In January 2022, motivated by our experience with eClinicalMedicine, we wrote about mishandling of published errors by journal editors. We had noticed that the methods used for the analysis of a cluster randomized trial published in the journal were invalid. Using a valid approach, we reanalyzed the raw data, which were shared with us by the original authors. The trial’s results were overturned. 

As Retraction Watch readers may recall, we subsequently submitted a manuscript describing why the original methods were invalid, what a valid analysis should be, and our results after conducting a valid analysis. After an initial desk rejection “in light of [the journal’s] pipeline” and further exchanges of correspondence, the journal shared our findings with the statistician involved in the original review and the original authors and sought their responses. 

After receiving the responses, both of which we thought contained factually incorrect statements, the editorial team eventually suggested that we summarize our full manuscript as a 1000-word letter for submission to the journal. We did not agree that a letter would allow us to fully communicate our methods and reanalysis. Thus, to meet the journal’s word limit while fully laying out our arguments, we posted our additional points as a preprint and cited the preprint in a letter we submitted to the journal.

It was then that we met another roadblock to correcting the literature.

Continue reading When editors confuse direct criticism with being impolite, science loses

Courage and correction: how editors handle – and mishandle – errors in their journals

Jasmine Jamshidi-Naeini

Last year, our group noticed an improper analysis of a purported cluster randomized trial (cRCT) in eClinicalMedicine, a Lancet journal, and requested deidentified raw data from the authors to conduct a proper analysis for the study design. 

Things were off to a good start. The authors shared their data immediately – which is commendable and, in our experience, rare. We reanalyzed the data using valid statistical procedures, which overturned the published conclusions. We subsequently submitted a manuscript describing our findings to the journal where the original paper was published.

That’s when things stopped going well.

Continue reading Courage and correction: how editors handle – and mishandle – errors in their journals

Coming up short: Journal retracts penis enlargement paper after realizing it was homeopathy

Researchers compared Impaza with sildenafil (Viagra)

Over the objection of all of the authors, a journal has retracted an article on a homeopathic approach to penis enlargement and virility after deciding that the putative remedy wasn’t potent enough for the task at hand. 

The paper, “Effects of chronic treatment with the eNOS stimulator Impaza on penis length and sexual behaviors in rats with a high baseline of sexual activity,” appeared in the International Journal of Impotence Research — a Springer Nature title — in March 2013. 

Among the authors of the article was Oleg Epstein, a Russian scientist whose company, OOO NPF Materia Medica Holding, of Moscow, makes homeopathic products. Epstein’s research has been the subject of multiple retractions, as we’ve reported, embarrassing reputable journals into whose pages he managed to publish papers on homeopathy. 

Impaza, a name which sounds more like a Subaru than a sexual aid, purportedly: 

Continue reading Coming up short: Journal retracts penis enlargement paper after realizing it was homeopathy

Time to say goodbye to “statistically significant” and embrace uncertainty, say statisticians

Nicole Lazar

Three years ago, the American Statistical Association (ASA) expressed hope that the world would move to a “post-p-value era.” The statement in which they made that recommendation has been cited more than 1,700 times, and apparently, the organization has decided that era’s time has come. (At least one journal had already banned p values by 2016.) In an editorial in a special issue of The American Statistician out today, “Statistical Inference in the 21st Century: A World Beyond P<0.05,” the executive director of the ASA, Ron Wasserstein, along with two co-authors, recommends that when it comes to the term “statistically significant,” “don’t say it and don’t use it.” (More than 800 researchers signed onto a piece published in Nature yesterday calling for the same thing.) We asked Wasserstein’s co-author, Nicole Lazar of the University of Georgia, to answer a few questions about the move. Here are her responses, prepared in collaboration with Wasserstein and the editorial’s third co-author, Allen Schirm.

So the ASA wants to say goodbye to “statistically significant.” Why, and why now? Continue reading Time to say goodbye to “statistically significant” and embrace uncertainty, say statisticians

Caught Our Notice: Hey peer reviewers — did you even read this paper??

What Caught Our Attention: A tree of life paper has been axed — and based on the information in the retraction notice, we’re wondering how it ever passed peer review.

Specifically, the notice states a review of the paper found “concerns regarding the study design, methodology, and interpretation of the data.” Overall, the research “contradict(s) a large body of existing literature and do(es) not provide a sufficient level of evidence to support the claims made in the paper.” Um, so what did it get right?

Continue reading Caught Our Notice: Hey peer reviewers — did you even read this paper??

Authors claim clinical trial data came from one center. It came from three.

A BMJ journal has retracted a 2017 paper that made a false claim about the clinical trial in question. 

The Acupuncture in Medicine paper reported the results of a clinical trial about the impact of acupuncture and Chinese herbal medicine on stroke, gathered from one center. However, in November, the editors of the journal discovered that the authors had completed the trial at three centers, and had already published the data in Scientific Reports in 2016. The authors say the duplication and misrepresentation of the data stemmed from “confusion and misunderstanding.” Continue reading Authors claim clinical trial data came from one center. It came from three.

Ethics, authorship concerns sink homeopathy paper by researchers arrested last year

For a host of reasons, a journal has retracted a paper co-authored by a researcher who reportedly once faced charges of practicing medicine without proper qualifications.

According to the retraction notice for “Psorinum Therapy in Treating Stomach, Gall Bladder, Pancreatic, and Liver Cancers: A Prospective Clinical Study,” published Dec. 8, 2010 in Evidence-Based Complementary and Alternative Medicine, the paper was plagued by:

Continue reading Ethics, authorship concerns sink homeopathy paper by researchers arrested last year

Child took wrong compound for over a year after “communication error”

Credit: Steven Depolo, Flickr

A journal is retracting a paper after it discovered researchers gave a child the wrong supplement for more than a year.

Rhiannon Bugno, managing editor for Biological Psychiatry, told Retraction Watch the mix-up did not put the patient at risk. However, the mistake was enough for the journal’s editor, John Krystal, of Yale University, to request the retraction of a 2016 paper describing the young girl’s experience taking the compound,“Rett-like Severe Encephalopathy Caused by a De Novo GRIN2B Mutation Is Attenuated by D-serine Dietary Supplement.”

Originally published June 17, 2016, the paper was retracted Jan. 15. Led by corresponding author Xavier Altafaj, of the University of Barcelona (UB) and Bellvitge Biomedical Research Institute (IDIBELL), researchers described using an amino acid, D-serine, to treat a child with a rare genetic disorder that affects neurons.

According to the notice, the researchers did use D-serine in lab work used as proof-of-concept; however, when it came time to try it in the patient, as a result of a “communication error:”

Continue reading Child took wrong compound for over a year after “communication error”

Overlooked virus “generated a mess,” infected highly cited Cell, PNAS papers

When Alexander Harms arrived at the University of Copenhagen in August 2016, as a postdoc planning to study a type of antibiotic resistance in bacteria, he carried with him a warning from another lab who had recruited him:

People said, “If you go there, you have to deal with these weird articles that nobody believes.”

The papers in question had been published in the Proceedings of the National Academy of Sciences in 2011 and Cell in 2013. Led by Kenn Gerdes, Harms’s new lab director, the work laid out a complex chain of events that mapped out how an E. coli bacterium can go into a dormant state, called persistence, that allows it to survive while the rest of its colony is wiped out.

Despite some experts’ skepticism, each paper had been cited hundreds of times. And Harms told us:

I personally did believe in the published work. There had been papers from others that kind of attacked [the Gerdes lab’s theory], but that was not high-quality work.

But by November 2016, Harms figured out that the skeptics had been right.  Continue reading Overlooked virus “generated a mess,” infected highly cited Cell, PNAS papers

“The sampling had been compromised:” MD Anderson researchers retract cancer study

Erich Sturgis

Researchers from the University of Texas, MD Anderson Cancer Center have retracted a 2015 paper after they discovered their samples had been compromised.

Exactly how the samples were compromised, and how and when the researchers found out, remains unclear.

Originally published March 30, 2015, in Cancer, “Genome-wide association study identifies common genetic variants associated with salivary gland carcinoma and its subtypes” reported that at least three protein-coding gene variants were associated with rare salivary gland cancers. In the paper, the authors — all but one of whom are affiliated with MD Anderson — cautioned that they still needed to confirm the findings and figure out the mechanism by which the genes might increase the risk of cancer.

On Oct. 23, 2017, the researchers asked the journal to either correct or withdraw the paper. According to the retraction notice issued Jan. 9, the researchers had discovered: Continue reading “The sampling had been compromised:” MD Anderson researchers retract cancer study