Prompted by PubPeer, biologist corrects three papers

GeneA biologist has corrected three papers that are nearly a decade old, after concerns were raised on PubPeer.

A commenter first posted a comment about an image in one of the papers in 2013; after more comments on other papers appeared in November 2015, author Zoya Avramova at the University of Nebraska-Lincoln received emails alerting her to the threads. She has responded, including to the 2013 comment, noting “the said images should have been assembled more carefully.”

After repeating some of the experiments to verify the results, she has now issued corrections on three papers, about the genetics of model organism Arabidopsis. The papers share a first author, Abdelaty Saleh, who was a postdoc in Avramova’s lab at the time of the work.

The correction notice for “Dynamic and stable histone H3 methylation patterns at the Arabidopsis FLC and AP1 loci,” appearing in the July 2016 volume of Gene, explains:  Continue reading Prompted by PubPeer, biologist corrects three papers

Authors reused images in three papers, concludes journal probe

JBCBiologists are retracting three papers after the journal concluded they contain reused images, designed to represent different experiments. The authors stand by the conclusions, some of which they say have been “extensively validated.”

The Journal of Biological Chemistry used image analysis software to evaluate the images, first published at least a decade ago. Unfortunately, the raw data behind the problematic images were not available. The authors have also corrected a fourth paper in another journal, and wrote on PubPeer that they are working with journals to address concerns in three more.

The papers share two authors: Mireia Duñach at the Autonomous University of Barcelona, and Antonio García de Herreros at the Institut Hospital del Mar d’Investigacions Mèdiques. A representative of the Institut Hospital del Mar d’Investigacions Mèdiques told us it is looking into Garcia de Herreros’s work.

We’ll start with “β-Catenin N- and C-terminal tails modulate the coordinated binding of adherens junction proteins to β-catenin,” which has been cited 45 times since it was published in 2002, according to Thomson Reuters Web of Science. The retraction notice says:

Continue reading Authors reused images in three papers, concludes journal probe

Poll: Is duplication misconduct?

RW logoIf authors duplicate portions of their own work in multiple papers — such as descriptions of methods, a boilerplate background to their field, etc. — should that be considered misconduct?

Of course, to many journals, duplication — also known as “self-plagiarism” is a retractable offense. A recent letter to the U.S. Office of Research Integrity (ORI) from the Council on Governmental Relations asked the agency to consider it misconduct, and “include self-plagiarism in the definition of plagiarism.” More specifically, the letter — reported by the Report on Research Compliance — says to new ORI director Kathy Partin:

Continue reading Poll: Is duplication misconduct?

Two math papers are too similar, both retracted

Advances in Differential EquationsA mathematician has lost two publications that overlap substantially.

In this case, it’s easy to see how editors were duped (as it were). Both journals received the papers within a few months of each other, and then published them in quick succession; both have since been retracted. The papers share a first author, Jin Li, affiliated with Jiujiang University in China.

How similar are Li’s papers? See for yourself.

Here’s the abstract for “Landesman-Lazer type condition for second-order differential equations at resonance with impulsive effects,” received by Advances in Difference Equations in June 2014 and published in September 2014: Continue reading Two math papers are too similar, both retracted

Duplicated data gets corrected — not retracted — by psych journal

Psychological Science

A psychology journal is correcting a paper for reusing data. The editor told us the paper is a “piecemeal publication,” not a duplicate, and is distinct enough from the previous article that it is not “grounds for retraction.”

The authors tracked the health and mood of 65 patients over nine weeks. In one paper, they concluded that measures of physical well being and psychosocial well being positively predict one another; in the other (the now corrected paper), they concluded that health and mood (along with positive emotions) influence each other in a self-sustaining dynamic.

As a press release for the now-corrected paper put it: Continue reading Duplicated data gets corrected — not retracted — by psych journal

Author threatens to sue Elsevier if paper remains retracted

Computational Materials Science

An author is prepared to sue Elsevier if it doesn’t un-retract his paper.

Computational Materials Science published two papers by the same author just eight months apart; nearly four years later, the journal pulled one for duplication. Author Masoud Panjepour, affiliated with Isfahan University of Technology in Iran, told us that he is working with a lawyer to negotiate a solution. However, if the publisher does not un-retract the paper, he does “not rule out filing a lawsuit.”

Here’s the retraction notice for “The effect of temperature on the grain growth of nanocrystalline metals and its simulation by molecular dynamics method,” which appeared last November:

Continue reading Author threatens to sue Elsevier if paper remains retracted

Researcher who sued to stop retractions gets his sixth

Mario Saad
Mario Saad

A sixth retraction has appeared for a diabetes researcher who previously sued a publisher to try to stop his papers from being retracted.

Mario Saad‘s latest retraction, in PLOS Biology, stems from inadvertent duplications, according to the authors.  Though an investigation at Saad’s institution — the University of Campinas in Brazil — found no evidence of misconduct, a critic of the paper told The Scientist he does not believe that the issues with blots were inadvertent.

Previously, Saad sued the American Diabetes Association to remove four expressions of concern from his papers; they were later retracted, even though Unicamp recommended keeping three of them published.

Here’s the new retraction notice, for “Gut Microbiota Is a Key Modulator of Insulin Resistance in TLR 2 Knockout Mice:” Continue reading Researcher who sued to stop retractions gets his sixth

PLOS ONE pulls maize paper with Photoshopped images

PLOS OnePLOS ONE has retracted a paper after editors learned that some of the images had been manipulated using Photoshop.

First author of the paper, Chuan Li, confirmed that he was responsible, and told Retraction Watch he apologizes for his “low-level mistake.”

Zhongfu Ni, last author of the paper from the China Agricultural University in Beijing, told us that all the co-authors agree with the retraction.

Here’s the retraction notice: Continue reading PLOS ONE pulls maize paper with Photoshopped images

“Mixed up” images earn biologists four retractions

525480Four different journals have pulled papers from the same authors due to alleged duplication or manipulation of images.

All four papers have two authors in common Jianting Miao and Wei Zhang, both based at The Fourth Military Medical University in Xi’an City, Shaanxi, China. Many of the other co-authors are also listed in two or three of the retracted papers.

Miao claims that the photographs got “mixed up” due to the researchers’ “great carelessness” and “insufficient knowledge.” He told us:                                                                                                                                                                      

Continue reading “Mixed up” images earn biologists four retractions

Biologist under investigation asks journal to swap image, journal retracts the paper

Suchitra Sumitran-Holgersson, via the University of Gothenburg
Suchitra Sumitran-Holgersson, via the University of Gothenburg

When a researcher discovered one of the images in her papers was a duplication, she asked the journal to fix it — but the journal decided to retract the paper entirely.

The researcher, Suchitra Sumitran-Holgersson, is currently being investigated by the University of Gothenburg in Sweden after a number of her papers were questioned on PubPeer. She told us the duplication was the result of ‘‘genuine human error.’’ Tissue Engineering Part A, however, decided the request to swap the image was a ‘‘cause for concern,’’ and chose to retract the paper. 

Here’s the retraction notice:

Continue reading Biologist under investigation asks journal to swap image, journal retracts the paper