Category: by journal

To catch a cheat: Paper improves on stats method that nailed prolific retractor Fujii

anaesthesiaThe author of a 2012 paper in Anaesthesia which offered the statistical equivalent of coffin nails to the case against record-breaking fraudster Yoshitaka Fujii (currently at the top of our leaderboard) has written a new article in which he claims to have improved upon his approach.

As we’ve written previously, John Carlisle, an anesthesiologist in the United Kingdom, analyzed nearly 170 papers by Fujii and found aspects of the reported data to be astronomically improbable. It turns out, however, that he made a mistake that, while not fatal to his initial conclusions, required fixing in a follow-up paper, titled “Calculating the probability of random sampling for continuous variables in submitted or published randomised controlled trials,” also published in Anaesthesia.

According to the abstract:

Continue reading To catch a cheat: Paper improves on stats method that nailed prolific retractor Fujii

Cancer Research retraction is fifth for Robert Weinberg; fourth for his former student

13.coverAnother domino has fallen in a chain of retractions for Robert Weinberg, the man who discovered the first tumor-causing gene in humans, along with the first tumor suppressor gene: Cancer Research just retracted a paper of his on some of the molecular steps to metastasis.

The paper, “Concurrent Suppression of Integrin α5, Radixin, and RhoA Phenocopies the Effects of miR-31 on Metastasis,” has been cited 70 times, according to Thomson Scientific’s Web of Knowledge. As we have noted before, Weinberg’s papers are frequently highly cited. His bio at the Whitehead Institute bills him as “a pioneer in cancer research.”

Four of Weinberg’s retracted papers — including this latest — share a first author: Scott Valastyan, once a very promising grad student in Weinberg’s lab. 

This retraction, like Valastyan’s others, is linked to his retracted 2009 Cell paper. (That paper was cited 482 times, and there’s even a video from the Cell press office to go with it). Continue reading Cancer Research retraction is fifth for Robert Weinberg; fourth for his former student

Another author withdrawal from JBC earns another opaque notice

Journal of Biological Chemistry1The authors of a 2014 study on the biochemical changes that can encourage the progression of cancer have withdrawn the paper from the Journal of Biological Chemistry.

The post from the JBC – which we’ve noted are rarely helpful – doesn’t provide any details or reason for the withdrawal. As usual, this is all we got:

Continue reading Another author withdrawal from JBC earns another opaque notice

Misidentified genetic sequence causes retraction of pathogen paper one month after publication

Genome Announcements

The author of an article mapping the genome of an infectious bacterium is pulling the paper because — well, it wasn’t the bacterium she thought it was.

Study author Celia Abolnik is retracting her paper in Genome Announcements because it didn’t actually map out the DNA of Mycoplasma meleagridis, a bacterium that typically infects turkeys but has recently been found in chickens.

The trouble was, the sequence for Mycoplasma meleagridis in the National Institute of Health’s DNA database, Genbank, was actually a different variety of bacteria — Mycoplasma gallinaceum, another scourge of poultry.

Here’s the notice for “Complete Genome Sequence of Mycoplasma meleagridis, a Possible Emerging Pathogen in Chickens:”

Continue reading Misidentified genetic sequence causes retraction of pathogen paper one month after publication

Editors retract algae study, citing “issues with the data”

International Journal of PhytoremediationThe International Journal of Phytoremediation  has issued a retraction for a 2013 article suggesting algae could shield against gamma radiation better than lead.

Sadly, such an innovation was not to be — the editors have pulled the paper, saying:

We are now cognizant that there are issues with the data and determinations made within the manuscript that cannot be corrected through a corrigendum.

The paper is now covered by a dizzying watermark. (The first page can be seen here.)

Here’s more from the retraction for “Shielding Property of Natural Biomass Against Gamma Rays”, authored by a group of professors at Amasya University, Aksaray University, and Suleyman Demirel University in Turkey:

Continue reading Editors retract algae study, citing “issues with the data”

Corrections (and one EoC) propagate for distinguished plant biologist, Olivier Voinnet

Olivier Voinnet
Olivier Voinnet

There may be some deeply rooted issues in the work of high-profile plant biologist Olivier Voinnet, biology department research director at ETH in Zurich. Corrections have continued to pile up months after his work was hit with a barrage of criticism on PubPeer. We’ve tracked a total of seven corrections over the past five months (not including the April retraction of a 2004 paper in The Plant Cell). One of the corrected papers also received an Expression of Concern this week.

Collectively, the corrected papers have accumulated more than 1200 citations.

In January, Voinnet said he planned to correct multiple papers, after receiving “an anonymous email.”

One of the recent corrections we found is for a 2003 article in The Plant Journal, “An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus,” which details using proteins from a tomato virus to help alter gene expression. The study has been cited 862 times, according to Thomson Scientific’s Web of Knowledge. Here’s the correction notice, posted June 8:

Continue reading Corrections (and one EoC) propagate for distinguished plant biologist, Olivier Voinnet

Lancet journal removes Buddha cover art following protest

Lancet inf disThe Lancet Infectious Diseases has removed a cover illustration of the Buddha contemplating a mosquito from its June, 2015 issue — a complement to a paper about malaria treatment in Cambodia — after receiving emails from readers who protested the depiction of the statue in a non-religious context.

After publishing the cover, the journal received “several emails” protesting the image, such as this one from Arjuna P R Aluwihare:

Continue reading Lancet journal removes Buddha cover art following protest

Duke University lung researchers cough up fourth retraction, due to “inconsistent” data

Journal of Applied PhysiologyThe Journal of Applied Physiology has retracted a 2012 respiratory study after the authors found “inconsistent” data that “could not be traced to their source.” It’s the fourth retraction for two of the researchers, including Erin Potts-Kant, who was arrested in 2013 for embezzling more than $14,000 from Duke University.

The study, “Effects of corticosteroid treatment on airway inflammation, mechanics, and hyperpolarized 3He magnetic resonance imaging in an allergic mouse model,” looked at how corticosteroid therapy, a steroid treatment used for asthma, worked on mice. It’s been cited four times, according to Thomson Scientific’s Web of Knowledge, and was one of the products of the environmental lung health research conducted by Potts-Kant and Duke professor William Foster, the other co-author on the retracted studies.

Here’s the complete retraction notice: Continue reading Duke University lung researchers cough up fourth retraction, due to “inconsistent” data

Macchiarini co-author objects to investigation’s misconduct verdict

dr-paolo-macchiarini
Paolo Macchiarini

One of Paolo Macchiarini’s co-authors on a 2011 Lancet paper describing an allegedly groundbreaking procedure to transplant an artificial trachea seeded with stem cells is objecting to a recent investigation that concluded Macchiarini had committed misconduct.

Ola Hermanson, who studies neural stem cells at Karolinska Institutet, argued in a report dated June 29 that the investigation contained “serious flaws and formal errors.”

Hermanson’s lengthy response (uploaded here except for supporting emails) is to the findings of an external review of allegations about Macchiarini’s work, conducted by Bengt Gerdin, of Uppsala University. In regards to the 2011 Lancet paper, Gerdin’s investigation found:

Continue reading Macchiarini co-author objects to investigation’s misconduct verdict

“Values were outside expected ranges”: Toxicology paper spiked after audit

Toxicological PathologyResearchers at the National Institute of Environmental Health Sciences have retracted a 2014 article after a review unearthed unresolved problems with the study’s control material.

The retracted paper, “Effect of Temperature and Storage Time on Sorbitol Dehydrogenase Activity in Sprague-Dawley Rat Serum and Plasma,” looked to test the durability and stability of sorbitol dehydrogenase, an enzyme used to detect cancerous liver damage in rats.

Here’s the complete retraction notice from Toxicologic Pathology :

Continue reading “Values were outside expected ranges”: Toxicology paper spiked after audit