Category: by country

Are there foxes in Tasmania? Follow the poop

Stephen Sarre, based at the University of Canberra in Australia, has made a career out of collecting and analyzing poop.

It’s a tough job, but someone’s got to do it. Part of his work is designed to answer a multi-million dollar question: Is Tasmania home to foxes, a pest that carries rabies and other diseases and can ravage local wildlife? According to the Australian news outlet ABC, the Tasmanian and Australian governments have spent $50 million (AUD) on hunting foxes on the island since 2001 — even though many have debated whether they are even there.

In 2012, after analyzing thousands of fecal samples, Sarre published a paper in the Journal of Applied Ecology which boldly claimed that “Foxes are now widespread in Tasmania.” But many outside researchers didn’t buy it, and quickly voiced their criticisms of the paper, namely that there may be problems with false positives and the methodology used to analyze the samples. Recently, the journal issued an expression of concern for the paper, citing an ongoing investigation into the allegations.

Here’s the expression of concern (paywalled, tsk tsk):

Continue reading Are there foxes in Tasmania? Follow the poop

Failed whistleblower suit is a reminder that public universities are hard to sue

The University of Louisville’s Kornhauser Library via Wikimedia

Suing the government is difficult. And because public universities often function as an arm of state governments, that makes them hard to sue, too, a fact reiterated in a whistleblower case decided earlier this year.

In January, Judge David Hale of the Western District of Kentucky dismissed a lawsuit filed by former employees of the University of Louisville alleging that the institution fraudulently secured millions in federal grants due to a biosafety program that had fallen out of compliance with federal regulations. The biosafety officers also alleged that they were wrongly terminated for pointing out the compliance issues to Louisville, the National Institutes of Health, and even the Federal Bureau of Investigation. But the judge’s order came before those issues would even be considered.

According to the suit, filed in 2015, plaintiffs Karen Brinkley and Carol Whetstone alleged that the university, seven principal investigators, and an administrator had worked to wrongly obtain as much as $165 million from the National Institutes of Health. Around 2008, according to the plaintiffs, the defendants began allowing persistent biosafety issues — improper training and biological material disposal methods, protocols with expired institutional biosafety committee approvals, performance of research tasks in labs with insufficient biosafety ratings — to taint their applications for multiple federal grants (the complaint didn’t specify how many). Brinkley and Whetstone filed suit under the False Claims Act (FCA), which allows individuals to recover money on behalf of the U.S. government; allegedly, the grants were improperly obtained because the defendants had certified that they were in compliance with NIH’s biosafety requirements, even though they knew that they were not. Continue reading Failed whistleblower suit is a reminder that public universities are hard to sue

The retraction countdown: How quickly do journals pull papers?

After Tina Wenz was found guilty of scientific misconduct, how long did it take for journals to retract the problematic papers?  The answer: Between three and nine months.

In September 2016, the University of Cologne found that Wenz had committed scientific misconduct in six papers and requested they all be retracted. From that point on, the retraction clock was ticking.

We’ve explored how long it takes a journal to act over the years, and we’ve found that the time between identifying a problem to retracting the paper can vary — and sometimes last years.

In Wenz’s case, one of the papers—published in Cell Metabolism in 2009—had already been retracted in 2015. Three of the remaining five were retracted in December 2016—a 2008 paper in Cell Metabolism, a 2009 paper in Proceedings of the National Academy of Sciences (PNAS), and a 2009 paper in the Journal of Applied Physiology.

In January 2017, the journal IUBMB Life pulled a 2014 paper flagged in the investigation. And just over nine months after Wenz was found guilty of misconduct, the last paper—published in 2013 in Mitochondrion—has been retracted.

The most recent notice states that the University of Cologne requested the retractions, after determining that the data had been “inappropriately manipulated.”

Here’s the retraction notice in Mitochondrion:

Continue reading The retraction countdown: How quickly do journals pull papers?

Fake peer review, forged authors, fake funding: Everything’s wrong with brain cancer paper

The paper had everything: Fake peer review, forged authors, even a fake funder.

In other words, it had nothing.

A 2015 paper is the latest retraction stemming from an investigation into fake peer review by Springer, which has now netted more than a hundred papers.

According to a spokesperson at Springer: Continue reading Fake peer review, forged authors, fake funding: Everything’s wrong with brain cancer paper

How much text recycling is okay?

Are there a limited number of ways to describe the the background and methods of an experiment? Once something has been written well, and vetted by editors, is it a waste of time to rewrite it ? And if text has been reused, how should that be indicated — if at all?

These are questions we’ve asked before — and are revisiting after reviewing a pair of commentaries published earlier this year in Research Integrity and Peer Review. We’ve certainly seen our fair share of retractions due to duplication (so many we can’t cover them all) — but in one commentary, Cary Moskovitz — the Director of Writing in the Disciplines at the Thompson Writing Program at Duke University — argues that some text recycling — aka, “self-plagiarism” or duplication — is sometimes unavoidable, and, in some situations, even preferable. He told us:

Continue reading How much text recycling is okay?

Historian returns prize for high-profile book with 70+ corrections

A historian based at Columbia University has returned a 2014 prize after criticisms prompted him to issue more than 70 corrections to his prominent book about North Korea.

Charles Armstrong told Retraction Watch he returned the 2014 John K. Fairbank Prize he received for “Tyranny of the Weak” due to “numerous citation errors.” The book has faced heavy criticism, including allegations of plagiarism and using invalid sources.

The American Historical Society, which issues the Fairbank Prize, released a statement last week:

Continue reading Historian returns prize for high-profile book with 70+ corrections

Unintended consequences: How authorship guidelines destroyed a relationship

It started as a simple email exchange over authorship. But it angered one researcher so much that it ended a 20-year collaboration.

In January 2017, a chemist based in Mexico had finished writing a paper describing the structure of a molecule. Sylvain Bernès, at the Instituto de Física Luis Rivera Terrazas, asked his co-author—the head of the lab where the molecule had been synthesized 10 years ago—to review the draft and include any co-authors involved in the initial work.

The researcher added three co-authors to the paper. Bernès became concerned. He wanted to follow the International Committee of Medical Journal Editors (ICMJE) authorship recommendations as strictly as possible. As far as Bernès could tell, none of the new authors had actually contributed to the work, potentially violating the recommendation about authorship contributions. Continue reading Unintended consequences: How authorship guidelines destroyed a relationship

“The correct values are impossible to establish:” Embattled nutrition researcher adds long fix to 2005 paper

A Cornell food researcher who has pledged to re-analyze his papers following heavy criticism of his work has issued a major correction to a 2005 paper.

The correction tweaks two tables, a figure, and the description of the methodology — and notes in two instances the correct findings are unknown, since the original data are unavailable. Andrew Gelman, a statistician at Columbia University and critic of Brian Wansink’s work, has dubbed the notice the “best correction ever.”

The paper, about whether changing the name of food influences its taste, was not among the batch of papers initially flagged by critics last year. Since then, researchers have raised additional questions about Wansink’s work; one of his papers was retracted in April. That same month, an internal review by Cornell University concluded that Wansink made numerous mistakes, but did not commit misconduct.

When we contacted Wansink about the correction, we received this statement from the Cornell Food and Brand Lab, which Wansink directs:

Continue reading “The correct values are impossible to establish:” Embattled nutrition researcher adds long fix to 2005 paper

“Some experiments were not performed appropriately:” Florida researchers lose two papers

Two molecular biologists have withdrawn two 2015 papers published in the same journal, citing image duplication and manipulation, among other issues.

One notice — published in June — explains that, after further investigation, the Journal of Biological Chemistry (JBC) found certain experiments “were not performed appropriately.” The other notice cites “missing data” and notes that certain data “did not accurately represent experimental conditions.”

The authors of the papers—Daniel L. Kaplan, associate professor at Florida State University who heads a genomics lab, and Irina Bruck, assistant scholar scientist in Kaplan’s lab—also received a correction in JBC this month, which cites image duplication.

The three notices, all published this month in JBC, may reveal a pattern, but there’s still a lot we don’t know. One of the two papers was questioned on PubPeer. Several commenters flagged duplicated images and had questions about the antibody used.

Here’s one retraction notice, published this month: Continue reading “Some experiments were not performed appropriately:” Florida researchers lose two papers

Researcher who tangled with CrossFit loses two more papers

An exercise scientist who ran a study of the CrossFit exercise program without an approved human subjects protocol has lost two more papers to retraction.

Both papers were retracted on June 26 by the editors of the International Journal of Exercise Science (IJES) with the agreement of last author Steven Devor, a former professor at The Ohio State University. Both have been retracted because the studies were carried out without proper IRB approval.

Earlier in June, another paper from the CrossFit study — which is still at the center of a legal battle between CrossFit and a competitor in the market for exercise instructor licensing — was retracted by the Journal of Strength and Conditioning Research (JSCR) for improper IRB approval. Devor resigned from OSU the day after the first retraction.

Only one of the newly retracted papers had anything to do with the CrossFit study: Published in April 2014, this paper suggested that the so-called “paleo” diet — a diet focused on meat and vegetables — is associated with “unfavorable” changes in cholesterols and other blood-based cardiovascular biomarkers. In addition to following the diet, subjects also participated in a CrossFit exercise program. Continue reading Researcher who tangled with CrossFit loses two more papers