“The sampling had been compromised:” MD Anderson researchers retract cancer study

Erich Sturgis

Researchers from the University of Texas, MD Anderson Cancer Center have retracted a 2015 paper after they discovered their samples had been compromised.

Exactly how the samples were compromised, and how and when the researchers found out, remains unclear.

Originally published March 30, 2015, in Cancer, “Genome-wide association study identifies common genetic variants associated with salivary gland carcinoma and its subtypes” reported that at least three protein-coding gene variants were associated with rare salivary gland cancers. In the paper, the authors — all but one of whom are affiliated with MD Anderson — cautioned that they still needed to confirm the findings and figure out the mechanism by which the genes might increase the risk of cancer.

On Oct. 23, 2017, the researchers asked the journal to either correct or withdraw the paper. According to the retraction notice issued Jan. 9, the researchers had discovered: Continue reading “The sampling had been compromised:” MD Anderson researchers retract cancer study

Most board members of journal resign to protest new editor, layoffs

Detlev Ganten

Nearly all of the editorial board members of a 150-year-old journal about the molecular underpinnings of medicine and disease have resigned their posts, protesting changes by publisher SpringerNature that they say “jeopardized the future and scholarly legacy of the Journal.”

In a December 1 letter, led by the three former editors in chief of the Journal of Molecular Medicine — Detlev Ganten, Gregg Semenza and Thomas Sommer — more than 70 then-editorial board members raised two objections: closing a small editorial office and laying off staff, and unilaterally appointing a new editor.

Regarding the decision to close the office at the Max Delbrück Center for Molecular Medicine (MDC) Berlin Buch, where it has been since 1995,  the editors and board members wrote: Continue reading Most board members of journal resign to protest new editor, layoffs

Caught Our Notice: Brian Wansink issues correction that’s longer than original paper

Title: Attractive names sustain increased vegetable intake in schools

What Caught Our Attention: One thing can be said for the corrections for Brian Wansink‘s papers — they aren’t short.  After James Heathers outlined some of his concerns about the highly cited study back in March, 2017, the journal has issued a correction, and it’s longer (1636 words) than the original, highly cited paper (1401 words). Some of the changes include explaining the children studied were preschoolers (3-5 years old), not preteens (8-11), as originally claimed. (It may be hard to imagine how the authors could make such a mistake, but they did it once before, in another retracted paper.) Even with all those words explaining the correction — we’re only including an excerpt of the entire notice below — some concerns still remain: Continue reading Caught Our Notice: Brian Wansink issues correction that’s longer than original paper

MD Anderson: No, we did not co-sponsor this cancer conference

Bharat Aggarwal

The University of Texas MD Anderson Cancer Center, of Houston, is asking a conference on cancer in Chennai, India to stop claiming it is a co-sponsor.

The meeting was the subject of a story in The New Indian Express, which reported that Baba Ramdev, a prominent yogi “who had claimed that cancer is divine justice for sins committed,” would be the chief guest at the meeting. Ramdev is scheduled to address the conference for 45 minutes this Thursday, its opening day.

As the story noted, one of the organizers of the meeting is Bharat Aggarwal, a former MD Anderson faculty member who has had to retract 18 papers, mostly for image manipulation.

I raised concerns about the conference yesterday (Sunday) on Twitter. MD Anderson responded within hours to say first that they were looking into the matter, and then to say that while it had sponsored the conference in the past, it was not sponsoring it this year: Continue reading MD Anderson: No, we did not co-sponsor this cancer conference

Unusual: Author uses a reference list to accuse a paper of plagiarism

Here’s an unusual way to allege plagiarism: Do it in the reference list.

That’s what Brian Levine, a professor in the College of Information and Computer Sciences at the University of Massachusetts in Amherst, did when he came across a paper he wanted to cite but suspected of plagiarism. When Levine published his 2017 paper, he cited the paper in question as:  

R.Rajan, “ Feasibility, Effectiveness, Performance and Potential Solutions on Distributed Content Sharing System [plagiarized],” Intl. J. Engineering and Computer Science, 5(1):15638–15649, Jan 2016 http://www.ijecs.in/ issue/v5- i1/30%20ijecs.pdf.

Levine’s paper, which explores a way of identifying perpetrators of online child pornography, provides no further details about the nature of the plagiarism or from what source the paper allegedly plagiarized. Continue reading Unusual: Author uses a reference list to accuse a paper of plagiarism

The RW Week In Review: Anti-gay bias, an authorship lawsuit; misconduct in industry vs. academia

We’ve been having some technical issues with the site, which may have kept some readers from accessing our content this week. We think we’ve figured out what was wrong, and fixed it, but in the meantime here’s what we were up to this week, in case you missed it:

Continue reading The RW Week In Review: Anti-gay bias, an authorship lawsuit; misconduct in industry vs. academia

Weekend reads: Papers from prison; profs’ kids as co-authors; a history journal flap

The week at Retraction Watch featured a look at whether scientists in industry or academia admit to more misconduct, another strange publication twist for a vaccine study, and the correction of a study that claimed anti-gay attitudes could take more than a decade off of gay peoples’ lifespans. Here’s what was happening elsewhere: Continue reading Weekend reads: Papers from prison; profs’ kids as co-authors; a history journal flap

PubMed shuts down its comments feature, PubMed Commons

The U.S. National Institutes of Health is closing PubMed Commons, the feature that enabled readers to post comments on abstracts indexed in PubMed.

NIH announced it will be discontinuing the service — which allowed only signed comments from authors with papers indexed in PubMed, among other restrictions — after more than four years, due to a lack of interest.

According to the statement, the last day to post a comment will be February 15:

Continue reading PubMed shuts down its comments feature, PubMed Commons

Three papers retracted… for being cited too frequently

An engineering journal has retracted three 2016 papers. The reason: They had been cited too often.

Although the reason for the retractions may sound odd, the editor, Minvydas Ragulskis, told Retraction Watch he was concerned an author had engaged in citation manipulation. Specifically, Ragulskis explained that the majority of the citations came from papers at a 2017 conference on which one of the authors, Magd Abdel Wahab, was chair—raising suspicion that he had asked conference presenters to cite his work.

Almost three-quarters of papers that cited Wahab’s work originated from the conference, which “is large enough to assume a high probability for citation manipulation,” Ragulskis said. (Wahab, Professor and Chair of Applied Mechanics at Ghent University in Belgium, was not a co-author on the conference papers that cited his work.)

Continue reading Three papers retracted… for being cited too frequently

Study that said hate cuts 12 years off gay lives fails to replicate

A highly cited paper has received a major correction as a result of the ongoing battle over attitudes towards gay people, when a prominent — and polarizing — critic showed it could not be replicated.  

In December 2017, researchers led by Mark Hatzenbuehler of Columbia University corrected the paper, originally published in Social Science & Medicine in February 2014, which showed that gay people who live in areas where people were highly prejudiced against them had a significantly shorter life expectancy. The corrigendum came more than a year after a researcher who has testified against same-sex marriage was unable to replicate the original study.

“Structural stigma and all-cause mortality in sexual minority populations,” has been cited 102 times, according to Clarivate Analytics’ Web of Science, and attracted media coverage when it was published, from outlets such as Reuters and U.S. News & World Report.

Continue reading Study that said hate cuts 12 years off gay lives fails to replicate