Caught Our Notice: Hey peer reviewers — did you even read this paper??

What Caught Our Attention: A tree of life paper has been axed — and based on the information in the retraction notice, we’re wondering how it ever passed peer review.

Specifically, the notice states a review of the paper found “concerns regarding the study design, methodology, and interpretation of the data.” Overall, the research “contradict(s) a large body of existing literature and do(es) not provide a sufficient level of evidence to support the claims made in the paper.” Um, so what did it get right?

Continue reading Caught Our Notice: Hey peer reviewers — did you even read this paper??

Survey says: A researcher wasn’t sure if he needed to correct a paper. So he created a poll.

Craig Jones

When geophysicist Craig Jones realized a figure in one of his published papers contained an error, he was on the fence about what to do. It was a clear mistake, but he’d seen much larger mistakes go uncorrected by other authors. Unsure if it warranted a correction, Jones polled readers of his blog to see what they thought.

The answer: 37 people responded, 23 of whom (62%) said he should correct the paper. In an update, Jones said he was prepping a correction to submit to the journal.

Jones, who is based at the University of Colorado Boulder and blogs under the title the “Grumpy Geophysicist,” told Retraction Watch:

Continue reading Survey says: A researcher wasn’t sure if he needed to correct a paper. So he created a poll.

A cancer researcher said she collected blood from 98 people. It was all her own.

A researcher collected her own blood and forged the labels so it would appear to be samples from nearly 100 people, according to a new finding of research misconduct released today by the U.S. Office of Research Integrity (ORI).

The former researcher at the University of Texas MD Anderson Cancer Center swapped her own blood samples for those taken from 98 human subjects. The misconduct affects two grant progress reports and two papers; one paper has already been retracted, and the former “research interviewer” — Maria Cristina Miron Elqutub — has agreed to correct or retract the other.

Adel El-Naggar, a co-author on both of the papers also based at the University of Texas MD Anderson Cancer Center, told Retraction Watch:

Continue reading A cancer researcher said she collected blood from 98 people. It was all her own.

Mount Sinai multiple sclerosis researcher admits to misconduct

Gareth John

A researcher who has received millions in funding from the U.S. National Institutes of Health and who runs a lab at the Icahn School of Medicine at Mount Sinai in New York has confessed to falsifying data in a 2014 paper.

Gareth John, who studies multiple sclerosis and other neurological diseases, “has expressed remorse for his actions,” according to a report released last week from the U.S. Department of Health and Human Services’ Office of Research Integrity. Continue reading Mount Sinai multiple sclerosis researcher admits to misconduct

A frustrated former editor asked a publishing group for help. He didn’t like what they said.

When the former editor of a public health journal didn’t get a straight answer about why the journal retracted his paper that was critical of corporate-sponsored research, he brought his concerns to an organization dedicated to promoting integrity in academic publishing. He wanted the group to help resolve the impasse he’d reached with the publisher, but was sorely disappointed.

David Egilman, the former editor of the International Journal of Occupational and Environmental Health, had been seeking answers about the paper for a year. In November, the journal’s editorial board resigned, in protest of the “apparent new direction that the journal appears to be moving towards.” They objected to the “unilateral withdraw[al]” of Egilman’s paper, with little explanation, the delay in publishing other papers that had been accepted under Egilman’s leadership, and the decision to appoint a new editor with industry ties.

Amidst all that upheaval at the journal, Egilman still wasn’t getting the answers he wanted about why his paper was withdrawn. So he brought his concerns to the Committee on Publication Ethics (COPE).

Continue reading A frustrated former editor asked a publishing group for help. He didn’t like what they said.

Thousands boycott new Nature journal about machine learning

More than two thousand researchers have signed a petition to boycott a new Nature journal over the fact it will be available only by subscription.

The new journal — Nature Machine Intelligence, about machine learning — plans to charge readers for access, unlike most other journals in the field. The researchers who signed the petition have pledged not to submit their work to the new journal, and will decline to review or edit papers for it, as well.

Most journals published by Nature Publishing Group are available only by subscription — but that doesn’t work for the machine learning community, the signatories argue:

Continue reading Thousands boycott new Nature journal about machine learning

Infighting at journal prompts retraction of editorial “full of misinformation”

An editor thought she did a great job running an anesthesiology journal. But her colleagues— including the new editor who took over for her—heartily disagree.

During her tenure at the journal, the outgoing editor penned an editorial taking credit for the journal’s rise to success. But, according to a new commentary published in the journal, the former editor’s article presented wrong statistics, and minimized the contributions of those who had come before her. So when the new editor took office, he retracted it—and published the lengthy commentary explaining why. Continue reading Infighting at journal prompts retraction of editorial “full of misinformation”

Chemists duke it out over who was first to discover a 30-year-old technique

Decades ago, unbeknownst to each other, two chemists were independently working on a screening approach to identify new potential drugs. Both published papers about the technique around the same time. So now, when scientists write papers that cite the technique, who should get credit for discovering it?

Decades later, that question still hasn’t been answered — and the researchers continue to argue, this time over one’s decision not to cite the other’s work.  

More than 30 years ago, Árpád Furkanow retired from Eötvös Loránd University in Budapestdeveloped an approach he says has had “outstanding importance” in drug development. The technique, called split-mix synthesis, made it possible to synthesize and screen millions of peptides at once, instead of one by one. Furka patented the method in 1982, presented an abstract in 1988, and published a paper in 1991. Continue reading Chemists duke it out over who was first to discover a 30-year-old technique

Researcher loses battle with Cell over wording of retraction notice

For months, a researcher has wrestled with a journal over the wording of an upcoming retraction notice. It appears that she has lost.

Earlier this week, Cell retracted the paper, despite the protests of first author Shalon Babbitt Ledbetter. When Ledbetter learned the journal was planning to retract the biochemistry paper over image manipulations, but wouldn’t name the culprit in the notice, she shared her concerns on PubPeer. Although a 2015 letter sent to Cell from Saint Louis University identified last author Dorota Skowyra as responsible for multiple manipulations, the journal wasn’t planning to say Skowyra was responsible in the retraction notice. Which would leave all other authors — particularly Ledbetter — under a cloud of suspicion.

Now, Cell Press has finally retracted the paper, along with another paper in Molecular Cell that lists Skowyra as corresponding author. Both notices describe image manipulations that were investigated by Saint Louis University (SLU). Neither identifies who is responsible.

Continue reading Researcher loses battle with Cell over wording of retraction notice

Author under fire has eight papers retracted, including seven from one journal

A researcher whose work on the use of nanomaterials has been heavily scrutinized on PubPeer — with one critic alleging a paper contained “obviously fabricated” images — has lost eight papers. [Editor’s note: See update below.]

The eight articles — seven from Biosensors and Bioelectronics and one from Analytica Chimica Acta, both published by Elsevier — all cite issues related to duplications, and conclude with some version of the following:

Continue reading Author under fire has eight papers retracted, including seven from one journal