Category: basic life sciences retractions

No confidence vote on sepsis paper data leads to Blood retraction

The journal Blood has retracted an article after the authors determined that they could not longer trust in the validity of the data.

The paper has been cited 22 times, according to Thomson Scientific’s Web of Knowledge. From the retraction notice:

Niessen F, Furlan-Freguia C, Fernández JA, Mosnier LO, Castellino FJ, Weiler H, Rosen H, Griffin JH, Ruf W. Endogenous EPCR/aPC-PAR1 signaling prevents inflammation-induced vascular leakage and lethality.

Blood. 2009;113(12):2859-2866.

The authors retract the 19 March 2009, paper cited above. Recently, the authors discovered that some primary data presented in this paper could not be independently reproduced. All coauthors concur with the retraction of the paper and apologize to the readers, reviewers, and editors of Blood for publishing these invalid data.

The nature of the data problem isn’t clear from that passage. But Blood editor Cynthia Dunbar told us that her journal Continue reading No confidence vote on sepsis paper data leads to Blood retraction

Four genetics papers retracted for duplication

Petter Portin, of the University of Turku, Finland, has been forced to retract four papers because they were duplicates of work he had already published.

Two of those retractions appear in the February 2011 issue of Hereditas. Here’s one retraction notice (link added):

The following article from Hereditas: Portin, P. ‘The effect of the mus309 mutation, defective in DNA double-strand break repair, on crossing over in Drosophila melanogaster suggests a mechanism for interference’, published online in Wiley Online Library (http://onlinelibrary.wiley.com/) on 1 September 2009, Hereditas, volume 146, pp. 162–176, has been retracted by agreement between the author, the Editor-in-Chief, Anssi Saura, and John Wiley & Sons A/S. The retraction has been agreed due to prior publication of a similar article in Genetica.

And the other (link added): Continue reading Four genetics papers retracted for duplication

Blood retracts two, including a disputed paper from the Karolinska Institute

The journal Blood has two retractions this month, one of which seems particularly interesting. So let’s deal with the other one first.

The paper, “MicroRNAs 15a/16-1 function as tumor suppressor genes in multiple myeloma,” appeared online in October 2010. But according to the retraction notice, the authors

have recently discovered that the cell lines used in their paper were inadvertently misidentified. The cell lines utilized in the paper have now been found to contain the bcr/abl translocation and most likely represent the K562 CML cell line, instead of MMS1 and RPM1 myeloma cell lines. Due to this issue, the relevance of the findings to myeloma and thus, the conclusions of the paper, are not supported by the data. The authors apologize to the readers, reviewers, and editors of Blood for publishing these erroneous data.

That seems straightforward enough, and we couldn’t find any evidence that this problem affected other publications.

The second paper, however, could be more significant. Continue reading Blood retracts two, including a disputed paper from the Karolinska Institute

Data fraud at Emory leads to retractions of three cardiology papers

An investigation by Emory University in Atlanta has led to the retractions of three articles containing falsified data, but the ambiguous wording of the notices leaves us wondering if they are implying more than they state.

Two of the papers appeared in the journal Arteriosclerosis, Thrombosis, and Vascular Biology. The notices in ATVB implicate a researcher named Lian Zuo, who worked in Emory’s division of cardiology.

Here’s one: Continue reading Data fraud at Emory leads to retractions of three cardiology papers

Update: After unexplained delay, Cell Cycle retracts paper related to work that formed the basis of anti-cancer company

In December, we reported on the retraction of a paper in the Proceedings of the National Academy of Sciences on a potential treatment for breast cancer. We later found out that the retracted research was part of the basis of a company that had an initial public offering a few weeks later. How the company dealt with the news of the retraction made for an interesting follow-up, and speaks well of the principles of the principals.

Here’s another follow-up. The retraction notice has now appeared of a related review in Cell Cycle that we reported would be withdrawn. Here’s the text: Continue reading Update: After unexplained delay, Cell Cycle retracts paper related to work that formed the basis of anti-cancer company

Another Cell retraction, and more questions than answers

A new retraction has appeared in the journal Cell. The article, “DNA-PKcs-PIDDosome: A Nuclear Caspase-2-Activating Complex with Role in G2/M Checkpoint Maintenance,” had initially appeared in February 2009.

According to the notice: Continue reading Another Cell retraction, and more questions than answers

Freedom from Information Act? Another JBC retraction untarnished by any facts

There’s helpful but uninformative:

Ivan: What’s the weather like today?

Adam: Sunny.

And then there’s uninformative as served up by the Journal of Biological Chemistry.

We’ve already recounted one teeth-grinding experience with the JBC, a publication of the American Society for Biochemistry and Molecular Biology. The case involved two papers in JBC by Axel Ullrich, an esteemed cancer researcher at the Max Planck Institute in Germany. According to Ullrich, one of his then-postdocs, Naohito Aoki, had manipulated figures that appeared in the papers, necessitating their retraction.

Round two involves another JBC retraction of a 2000 paper by Aoki and co-author Tsukasa Matsuda, titled ‘A cytosolic protein-tyrosine phosphatase PTP1B specifically dephosphorylates and deactivates prolactin-activated STAT5a and STAT5b.’ The paper has been cited more than 100 times, according to Thomson Scientific’s Web of Knowledge.

According to the notice: Continue reading Freedom from Information Act? Another JBC retraction untarnished by any facts

Aftermath: Gut-wrenching misstep leads to retraction, frayed feelings and a paperless postdoc

Graham Ellis-Davies says January 25th was one of the worst days of his life. That was when the journal ChemBioChem retracted an article, published barely two weeks earlier, for a mistake Ellis-Davies blames squarely on himself.

The fallout has been nearly two months of painful self-recrimination, a tattered friendship and, perhaps most significant, he adds, the wasted effort of a postdoc who poured months of research into a now worthless publication. Continue reading Aftermath: Gut-wrenching misstep leads to retraction, frayed feelings and a paperless postdoc

A Nature chain retraction for Arabidopsis paper, and some unanswered questions

courtesy Nature

If a paper is retracted, should papers that cite it get retracted, too? We’ve been on the lookout for this kind of move, which we figure is consistent with cleaning up the scientific record. Today, one appears in Nature.

The original paper, “Mediation of pathogen resistance by exudation of antimicrobials from roots,” purported to show how a particular bug evades the immune system of Arabidopsis, a plant commonly used in the lab. It has been cited 51 times, according to Thomson Scientific’s Web of Knowledge.

The retraction notice says that the paper’s conclusions could no longer be supported because one of the key references — a paper in the Journal of Agricultural and Food Chemistry by many of the same authors — had been retracted: Continue reading A Nature chain retraction for Arabidopsis paper, and some unanswered questions

Crystal myth: 11 more retractions from crystallography journal after 2010 fakery

About a year ago, Acta Crystallographica Section E issued a bombshell editorial. The journal was pulling 70 papers from two groups of researchers at the same Chinese university after discovering that the structures they reported had been fakes.

As the editorial explained, the fraud was detected during a routine review of the structures by Ton Spek, of Utrecht University in The Netherlands. According to the editorial: Continue reading Crystal myth: 11 more retractions from crystallography journal after 2010 fakery