Category: Gene

A journal printed a sharp critique of a paper it had published. If only it had checked with the authors first.

In 2016, researchers published a paper showing that an RNA molecule may be overactive in breast tumor tissue. But after reading the paper, three biologists believed the data supported the opposite conclusion.

What happened after that is a tale of misunderstandings and unnecessarily bruised feelings. We’ve seen plenty of cases where researchers ignore criticism, which at first glance seemed to be the case here. But upon closer inspection, it wasn’t. Continue reading A journal printed a sharp critique of a paper it had published. If only it had checked with the authors first.

Author loses five papers, most for “compromised” peer review

PLOS OnePLOS ONE has retracted three papers after the first author admitted to submitting the manuscripts without co-authors’ consent, and an investigation suggested that two out of the three papers had received faked reviews.

Last August, the same author — Lishan Wang of the Shanghai Jiao Tong University — lost two more papers (one in Tumor Biology and the other in Gene), also after the peer review process was found to be compromised. All five papers — which share other authors in common — were originally published in 2013, and four list Wang as the first author. The retractions follow an investigation by Shanghai Jiao Tong University.

Here’s the retraction notice for two of the PLOS ONE papers, issued on July 26: Continue reading Author loses five papers, most for “compromised” peer review

Prompted by PubPeer, biologist corrects three papers

GeneA biologist has corrected three papers that are nearly a decade old, after concerns were raised on PubPeer.

A commenter first posted a comment about an image in one of the papers in 2013; after more comments on other papers appeared in November 2015, author Zoya Avramova at the University of Nebraska-Lincoln received emails alerting her to the threads. She has responded, including to the 2013 comment, noting “the said images should have been assembled more carefully.”

After repeating some of the experiments to verify the results, she has now issued corrections on three papers, about the genetics of model organism Arabidopsis. The papers share a first author, Abdelaty Saleh, who was a postdoc in Avramova’s lab at the time of the work.

The correction notice for “Dynamic and stable histone H3 methylation patterns at the Arabidopsis FLC and AP1 loci,” appearing in the July 2016 volume of Gene, explains:  Continue reading Prompted by PubPeer, biologist corrects three papers

Seven papers flagged earlier for fake reviews now retracted by Elsevier

elsevierElsevier has now retracted the seven papers it flagged in October as being affected by fake peer reviews.

If you’re not keeping track, we are: We have logged a total of about 300 retractions for fake peer review, in which some aspect of the peer-review process becomes compromised — for instance, in the case of the newly retracted papers, authors appear to have created fake email accounts in order to pose as reviewers and give the green light to their own papers.

The same retraction note applies to five of the recently retracted papers:

Continue reading Seven papers flagged earlier for fake reviews now retracted by Elsevier

Elsevier retracting nine papers for fake peer review

elsevierThe fake peer review retraction count continues to mount.

Elsevier is retracting nine papers from five journals because fake email addresses for reviewers were provided during submission of the original manuscripts. According to a statement from the publisher: Continue reading Elsevier retracting nine papers for fake peer review