Caught Our Notice: Journals still (slowly) purging archives of bad cell line studies

Via Wikimedia

Title: Tanshinone IIA Induces Apoptosis in Human Oral Cancer KB Cells through a Mitochondria-Dependent Pathway

What Caught Our Attention: Thousands of papers have relied on contaminated or wrong cell lines, a problem journals have not been particularly proactive in addressing. So far, only a few studies have been retracted for using misidentified cell lines. Continue reading Caught Our Notice: Journals still (slowly) purging archives of bad cell line studies

Ever been asked to remove a reference for libel concerns? These authors have

Last month, Nature Ecology & Evolution published a series of responses to a previous article recommending essential reading for all ecologists. In one response, the authors argue that the list is highly biased in favor of white male authors, and raises the problem of bullying and harassment in academia. But the letter is missing one key reference from its original submission: To a recent news story in Science reporting “disturbing” sexual harassment allegations against a prominent field researcher.

Why is the reference missing?

Because the editor at Nature Ecology & Evolution asked the authors to take it out, citing concerns about libel.

Here’s the note the authors received on their original submission:

Continue reading Ever been asked to remove a reference for libel concerns? These authors have

Accusations of ”false claims” in anti-global warming paper unresolved after three years

Three years after receiving a complaint about extensive plagiarism and major errors in an anti-global warming paper, Elsevier says it’s still reviewing the allegations.

In 2014, readers complained to the Elsevier journal Renewable and Sustainable Energy Reviews about plagiarism and technical flaws in a 2013 paper questioning mainstream climate change science.

When we first began reporting the story last year, a spokesperson for Elsevier told us:

Continue reading Accusations of ”false claims” in anti-global warming paper unresolved after three years

They thought they might solve the world’s energy problems. Then they realized they were wrong.

Frederick MacDonnell

Researchers are retracting a 2016 PNAS paper that described a way to create gasoline-like fuels directly from carbon dioxide in the atmosphere.

Senior author Frederick MacDonnell, a professor at the University of Texas at Arlington (UTA), told us he originally thought his team had made a preliminary breakthrough that might “solve the world’s energy problems.” Instead, he said:

It was an elaborate trap we fell into.

In a retraction notice that contains more information than we usually see, MacDonnell and his co-authors wrote: Continue reading They thought they might solve the world’s energy problems. Then they realized they were wrong.

After Elsevier knew an author faked reviews, it kept accepting his papers for more than a year

In March 2017, Christopher Blanford received an email from an editor at the Journal of Crystal Growth. Blanford had been named as a suggested reviewer for a manuscript, and the editor, Arnab Bhattacharya, wanted to verify that the Gmail account the authors provided was legitimate.

It was not.

Blanford—a senior lecturer in biomaterials at the University of Manchester, UK—thought it was an “amusing coincidence” that he was chosen as a fake reviewer, given that he has written about malpractice in academic publishing. He confirmed the Gmail account was not his, and the other two suggested reviewers told Bhattacharya, a professor at the Tata Institute of Fundamental Research in Mumbai, India, the same thing.

Continue reading After Elsevier knew an author faked reviews, it kept accepting his papers for more than a year

Caught Our Notice: Unusual — journal flags paper for concerns, then updates them

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Title: Filled and peptide-modified single-walled carbon nanotubes: synthesis, characterization, and in vitro test for cancer cell targeting

What Caught Our Attention: After an expression of concern (EOC) is published in a journal, the usual procedure is to either publish a subsequent correction or retraction — or, unfortunately, leave it sit ad infinitum. But apparently, there’s another option. Continue reading Caught Our Notice: Unusual — journal flags paper for concerns, then updates them

Caught Our Notice: After ORI flags a paper by former grad student, university flags another

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Title: The L3MBTL3 Methyl-Lysine Reader Domain Functions As a Dimer

What Caught Our Attention: Six months ago, the U.S. Office of Research Integrity (ORI) determined that former graduate student Brandi Baughman had doctored 11 figures in a PLOS ONE article, which was retracted shortly after.  The PLOS ONE paper listed two affiliations for Baughman — the National Institute of Environmental Health Sciences and the University of North Carolina, Chapel Hill (UNC); now UNC has triggered a second retraction of a paper co-authored by Baughman, also due to research misconduct. Although the ORI notice makes no mention of this additional paper, the agency recently took a “targeted approach” by not issuing comprehensive findings of misconduct for one researcher, in order to conserve resources. Of course, sometimes universities make findings that don’t meet the ORI’s bar, too. Continue reading Caught Our Notice: After ORI flags a paper by former grad student, university flags another

Another retraction to appear for Cornell food scientist Brian Wansink

Brian Wansink

The new year will bring a sixth retraction for food scientist Brian Wansink, whose work has been under fire for all of 2017.

Although the notice has not yet been released, the journal Appetite plans to retract a 2003 paper about the different forces that motivate people to try new foods (referring, in this specific context, to soy).

It’s unclear why “Profiling taste-motivated segments” is being retracted (we asked the journal, but haven’t immediately heard back); some potential issues were flagged in March by Nick Brown, a PhD student who has devoted hundreds of hours to analyzing Wansink’s work (and forwarded us the email from Appetite confirming the upcoming retraction).

For instance, Brown alleged the article contains duplicated material, and similarities to the results from another 2002 paper that also measured soy consumption. After analyzing those two papers and a 2004 paper (also about eating soy), Brown concluded:

Continue reading Another retraction to appear for Cornell food scientist Brian Wansink

Caught Our Notice: Researcher who sued PubPeer commenter draws 19th retraction  

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Title: Increased Ras GTPase activity is regulated by miRNAs that can be attenuated by CDF treatment in pancreatic cancer cells

What Caught Our Attention: We’ve been following cancer scientist Fazlul Sarkar for years, as he (unsuccessfully) sought to expose the identity of a PubPeer commenter who he believes cost him a job offer. In November 2016, the ACLU released a copy of a misconduct investigation report compiled by Wayne State University, which concluded Sarkar ran a laboratory “culture” of “fabrication, falsification and/or plagiarism of data,” and recommended the retraction of 42 papers and correction of 10 papers. He’s now lodged his 19th retraction. Continue reading Caught Our Notice: Researcher who sued PubPeer commenter draws 19th retraction  

JAMA journal calls for formal investigation into surgery group’s work

A JAMA journal has issued an expression of concern for a 2013 paper after discovering “substantial overlap” with a recently retracted paper in another journal.

In April 2017, the editors of JAMA Otolaryngology − Head & Neck Surgery received allegations that the paper included data that had been published in other journals. After investigating, the editors discovered extensive overlap between several sections of the JAMA paper and a now-retracted 2015 paper by the same group. The 2015 paper, published in the Journal of the American College of Surgeons (JACS), was pulled in July 2017, after the editors determined the statistical results were “incorrect” and “the data do not support the conclusions of the article.”

Given the overlap between the two papers, the JAMA editors contacted the University of L’Aquila, where the authors work, to request a formal investigation to evaluate the “integrity of the research.” Jay Piccirillo, the editor of JAMA Otolaryngology − Head & Neck Surgery, told us:

Continue reading JAMA journal calls for formal investigation into surgery group’s work