Author: Jeffrey Perkel

Structural biology corrections highlight best of the scientific process

Nature_latest-coverIf you need evidence of the value of transparency in science, check out a pair of recent corrections in the structural biology literature.

This past August, researchers led by Qiu-Xing Jiang at the University of Texas Southwestern Medical Center corrected their study, first published in February 2014 in eLife, of prion-like protein aggregates called MAVS filaments, to which they had ascribed the incorrect “helical symmetry.” In March, Richard Blumberg of Harvard Medical School, and colleagues corrected their 2014 Nature study of a protein complex called CEACAM1/TIM-3, whose structure they had attempted to solve using x-ray crystallography.

In both cases, external researchers were able to download and reanalyze the authors’ own data from public data repositories, making it quickly apparent what had gone wrong and how it needed to be fixed — highlighting the very best of a scientific process that is supposed to be self-correcting and collaborative. Continue reading Structural biology corrections highlight best of the scientific process

50 years later, is it time to retract a retraction by a Nobel prize-winning author?

Georg Wittig
Georg Wittig

It’s not often that an article is retracted only to be later proven correct. But that may have happened this past summer in the chemistry literature.

In July, a group of researchers recapitulated an experiment largely similar to one that Nobelist Georg Wittig had performed – and subsequently retracted — decades earlier. Their findings suggest Wittig may actually have gotten it right the first time.

On July 27, Peter Chen of ETH Zurich and colleagues published an article online in the journal Angewandte Chemie International Edition that describes a new method for appending a carbon atom to an unsaturated hydrocarbon to create a three-membered ring – a useful chemical transformation known as cyclopropanation. Yet, it was not the first time researchers had reported such a process. As Chen and his colleagues note in the Israel Journal of Chemistry, Georg Wittig of the Ruprecht-Karls-Universität Heidelberg (who would go on to win the chemistry Nobel Prize in 1979) and Volker Franzen reported a similar reaction in 1960 in Angewandte Chemie, a German-language publication. Continue reading 50 years later, is it time to retract a retraction by a Nobel prize-winning author?

Should Linus Pauling’s erroneous 1953 model of DNA be retracted?

Linus Pauling, via Wikimedia

We love history at Retraction Watch, but with few exceptions, such as covering what seems to have been the first-ever English language retraction in 1756, the daily march of retractions doesn’t leave us much time to take steps back. So we’re very glad to be able to present a guest post by our friend Jeff Perkel about a classic paper that scientists have known to be wrong for most of its nearly 60-year-life — and yet remains in the literature.

The date is December 31, 1952. Linus Pauling, the CalTech wunder-chemist who had recently solved the secondary structure of proteins by describing the alpha-helix and the beta-sheet, has just submitted a “Proposed Structure for the Nucleic Acids” to the Proceedings of the National Academy of Sciences. The PNAS description appears in February 1953 and runs for 14 pages, with seven figures and two tables (compare that with Watson and Crick’s one-pager two months later in Nature).

Pauling also submitted a short note to Nature to alert that journal’s readers to the basics of the PNAS paper. The Nature note appeared in the journal’s February 21 issue: Continue reading Should Linus Pauling’s erroneous 1953 model of DNA be retracted?