Pharmacology journal expresses concern over “similar, but updated” review

The British Journal of Clinical Pharmacology has issued an “expression of concern” for a 2003 review article, based on a previous lecture, with close echoes to a paper that had appeared in one of The Lancet titles.

Here’s the notice for the article, by Peter Winstanley, dean of the Warwick Medical School in the United Kingdom: Continue reading Pharmacology journal expresses concern over “similar, but updated” review

Elsevier parasitology journal retracts paper after finding author made up peer reviewer email addresses

Note to authors: If a journal asks you to suggest reviewers for your submitted manuscript, don’t thank them by faking the reviewer’s emails.

You might just get caught.

That’s what happened recently at Experimental Parasitology, according to the retraction notice for “Entamoeba histolytica: Cloning, expression and evaluation of the efficacy of a recombinant amebiasis cysteine proteinase gene (ACP1) antigen in minipig:” Continue reading Elsevier parasitology journal retracts paper after finding author made up peer reviewer email addresses

PLoS ONE expresses concern over flu vaccine paper

via Wikimedia

PLoS ONE has issued an expression of concern over a  2010 paper by Chinese scientists about how the immune system responds to the vaccine against the swine flu.

The article, “Protection Induced on Day 10 Following Administration of the 2009 A/H1N1 Pandemic Influenza Vaccine,” claimed to study 58 subjects given the inoculation (more on that below) and that Continue reading PLoS ONE expresses concern over flu vaccine paper

Rabies paper retracted for plagiarism, and more from the Journal of Clinical Pathology

A cardinal (if oft-broken) rule of headline writing is to avoid the use of question marks. We think it’s particularly important to do so when the potential for ironic misadventure lurks.

To wit: The Journal of Clinical Pathology (JCP) has withdrawn/retracted a 2008 paper by a group of Indian authors (from the National Institute of Mental Health and Neuro Sciences, at Deemed University) whose cliff-hanging title asks the question “Tracking the footprints of the rabies virus: are we any closer to decoding this elusive virus?” Continue reading Rabies paper retracted for plagiarism, and more from the Journal of Clinical Pathology

Eye of the needle? Paper about camels gets rejected, then published, then retracted

photo by http://www.flickr.com/photos/bysheribeari/ via Flickr

If there’s one thing worse than having your paper rejected by a journal, it’s having it retracted. But usually a paper has to be accepted before it’s published and withdrawn.

Not so for a study from the United Arab Emirates, “Detection and genotyping of GB virus-C in dromedary camels in the United Arab Emirates,” published in 2010 in Veterinary Microbiology.

The editors of the journal ruminated — hey now! is this thing on? — on the paper,  only to give it the thumbs down. But come to find out, it got published anyway. Thus, the following retraction notice, which appeared online last month: Continue reading Eye of the needle? Paper about camels gets rejected, then published, then retracted

Retraction (in all but name) of flu paper raises eyebrows

When is a retraction not a retraction? Why, when it’s a correction, of course — like the one the journal Emerging Infectious Diseases issued this month:

In the article Reassortment of Ancient Neuraminidase and Recent Hemagglutinin in Pandemic (H1N1) 2009 Virus (P. Bhoumik, A.L. Hughes), errors were made in selection of the hemagglutinin (HA) and neuraminidase (NA) sequences for the initial and subsequent data sets. As a result, the authors incorrectly concluded that the NA gene of the pandemic (H1N1) 2009 virus is of a more ancient lineage than the HA. Other researchers (and the authors) have not been able to reproduce the findings when using HA and NA matched pairs from viruses chosen on the basis of geography and time and correctly have pointed out errors in the data set that make the original conclusions invalid.

In other words, 1) the article was based largely on an error and 2) the central point could not be reproduced, two flaws that, at least in our book, usually constitute grounds for retraction.

The paper was written by Priyasma Bhoumik and Austin Hughes. Bhoumik, now a post-doc at Harvard, at the time was a PhD student at the University of South Carolina, where Hughes is a senior faculty member. Funding for the work came to Hughes from the National Institutes of Health, according to the original article.

We spoke with Hughes, who said that in this case, correction versus retraction is a distinction without a difference: Continue reading Retraction (in all but name) of flu paper raises eyebrows

Why did Science partially retract the XMRV-chronic fatigue syndrome paper?

If past experience is any indication, billions of pixels will be spilled in the coming days as scientists and advocates debate the latest twist in the story of XMRV, or xenotropic murine leukemia-related virus, and chronic fatigue syndrome (CFS). Today’s news is that Science is partially retracting a 2009 paper by Judy Mikovits and colleagues, including Vincent Lombardi, purporting to show a link between the virus and the syndrome — a paper about which they issued an Expression of Concern in May. The retraction is of a table and a figure — more on that in a bit.

In an excellent blow-by-blow account in Science of the nearly 20-year-long saga, also out today, Jon Cohen and Martin Enserink review the unusual circumstances of that Expression of Concern. Science editor-in-chief Bruce

Alberts and Science Executive Editor Monica Bradford had first suggested that Mikovits and her co-authors retract the paper voluntarily. “Science feels it would be in the best interest of the scientific community,” they wrote in a 26 May letter. Mikovits was livid and questioned Alberts’s motives. “Who wrote that letter? I don’t think it was Science,” she says. The co-authors thought the retraction request was premature, too. “What if we walk away from this based on contamination and it’s not contamination?” Lombardi asked. “You’ve got to give us time to figure this out.”

Alberts stresses that they floated the retraction idea because Science already planned to publish the Expression of Concern. “It wasn’t a public call for retraction,” he notes, emphasizing that the recipients shared it with the media. He also does not think it would have been premature, although he says it’s often a tough call whether to retract a paper. “Ultimately, it requires expert judgment and a lot of sensitivity to the issues,” he says. “We had lost confidence in the results.”

As Science noted in May, two studies accompanied the May Expression of Concern Continue reading Why did Science partially retract the XMRV-chronic fatigue syndrome paper?

University of Sao Paulo fires professor after a retraction for plagiarism

February has turned out to be a bad month for people found guilty of plagiarism. On Friday, we covered the case of the German foreign defense minister who lost his PhD after his university became aware he had copied passages from newspaper stories into his thesis.

And now we’ve learned that the University of Sao Paolo Paulo (USP) dismissed a full professor earlier this month after an investigation into a study he retracted last year because parts of it had been plagiarized. It has also stripped one of the professor’s former students of her PhD. Continue reading University of Sao Paulo fires professor after a retraction for plagiarism

Clinical Infectious Diseases retracts antibiotic guidelines after posting uncorrected version

A few days after Clinical Infectious Diseases published a set of guidelines for using antibiotics in patients with cancer and dangerously compromised immune systems, we noticed that they had retracted the paper. The Medline notice read: Continue reading Clinical Infectious Diseases retracts antibiotic guidelines after posting uncorrected version

Cracking the Mori case: A reviewer describes how manipulated images came to light

Naoki Mori

We’ve had two questions since learning of the fraud case involving Naoki Mori: Who discovered the manipulations? And how?

We now have answers. We recently received an e-mail from a researcher who specializes in Mori’s field — cancer viruses — and who claims to have been a reviewer of a paper he submitted early last year to a journal in his field. (We’re obscuring some details to maintain our source’s anonymity.)

During what turned out to be a “painful” review of the manuscript: Continue reading Cracking the Mori case: A reviewer describes how manipulated images came to light