“All very painful:” Two retractions to watch for, in eLife and PLOS ONE

We have news of two upcoming retractions, both following critiques on PubPeer.

PLOS ONE is retracting a 2012 paper by researchers at the Istituto Superiore di Sanità in Rome and the World Health Organization’s International Agency for Research on Cancer in Lyon, France, “Interferon-β Induces Cellular Senescence in Cutaneous Human Papilloma Virus-Transformed Human Keratinocytes by Affecting p53 Transactivating Activity.”

PubPeer commenters first left critiques of the paper on August 6 of last year, noting likely splicing and other manipulation of images. Several days later, pseudonymous whistleblower Claire Francis contacted the journal to flag similar issues. On Wednesday of this week, a journal representative emailed Francis to say the paper would be retracted: Continue reading “All very painful:” Two retractions to watch for, in eLife and PLOS ONE

A real headache: Here’s one from the “What else could go wrong?” files

Researchers in China have retracted a 2016 paper in Oncology Letters on the anti-cancer properties of aspirin because, well, it was a disaster from top to bottom.

In the spirit of showing rather than telling, we’ll let the retraction notice do the work: Continue reading A real headache: Here’s one from the “What else could go wrong?” files

Two papers yanked for lack of formal ethics approval

By Nick Youngson

Get it in writing. That’s the moral in a pair of retractions in different journals after authors claimed to have received oral — but not written — ethics approval for their research.

One paper, in the International Journal of Pediatrics, a Hindawi title, came from a group in Kuwait and Greece. Titled “Prevalence and associated factors of peer victimization (bullying) among grades 7 and 8 middle school students in Kuwait, the article appeared in February 2017.

According to the retraction notice: Continue reading Two papers yanked for lack of formal ethics approval

When a paper duplicates one in another language, how can editors spot it?

By Petr Kratochvil

Same tea, different mug. Biomolecules, an MDPI journal, has retracted a 2018 paper by on the salubrious effects of tea because the authors had previously published the same article in a Chinese-language journal.

The paper, “Evaluation of anti-obesity activity, acute toxicity, and subacute toxicity of probiotic dark tea,” came from researchers in China and one from Harvard University (oddly, a post-doc in applied physics).

The case highlights a plagiarism problem that may may be difficult to spot, it turns out. According to the retraction notice, the authors were using the same tea leaves in a different cup: Continue reading When a paper duplicates one in another language, how can editors spot it?

Journal temporarily withdraws eight papers after publisher mistake

Publishers love their embargoes, whether they’re of papers that aren’t open access yet, or are available to the media before they’re published. Apparently, however, they also break embargoes, just like the journalists they sometimes sanction for the same sin.

Take Oxford University Press, which publishes the journal Physical Therapy for the American Physical Therapy Association (APTA). Late last month, the journal temporarily withdrew eight papers because, well, the publisher broke the journal’s embargo. Jan Reynolds, the APTA’s managing editor for the journal and director of scientific communications, explained to Retraction Watch that Continue reading Journal temporarily withdraws eight papers after publisher mistake

Weekend reads: Journal editor fired for homophobic comments; “three-parent baby” paper mega-correction; the Bette Midler journal club

Before we present this week’s Weekend Reads, a question: Do you enjoy our weekly roundup? If so, we could really use your help. Would you consider a tax-deductible donation to support Weekend Reads, and our daily work? Thanks in advance.

The week at Retraction Watch featured plagiarism by a priest; retraction of a creationist paper “published in error;” and how a PubPeer comment led a university to reopen an investigation. Here’s what was happening elsewhere: Continue reading Weekend reads: Journal editor fired for homophobic comments; “three-parent baby” paper mega-correction; the Bette Midler journal club

Eyes wide shut at vision journal as retraction notice misses the point

Photo by Steve H.

Molecular Vision appears to have been flying blind when it retracted a 2013 paper by Rajendra Kadam and colleagues.

In December 2018, Kadam, a former “golden boy” in pharmaceutical research at the University of Colorado, Denver, was the subject of a finding from the U.S. Office of Research Integrity, which stated that he had fabricated his data. As part of the agreement, Kadam agreed to retract a paper in Molecular Vision. .

Kadam, who in 2016 had his doctoral degree revoked by UC Denver, two years after the university completed an investigation and sent its finding to the Office of Research Integrity (ORI), now has eight retractions, two expressions of concern and a correction. Seven of them mention fabrication of data. But Molecular Vision, the most recent addition to the list, does not.

The paper was titled “Suprachoroidal delivery in a rabbit ex vivo eye model: influence of drug properties, regional differences in delivery, and comparison with intravitreal and intracameral routes.” Its retraction notice, issued February 18, states: Continue reading Eyes wide shut at vision journal as retraction notice misses the point

Semi-automated fact-checking for scientific papers? Here’s one method.

Jennifer Byrne

Wouldn’t it be terrific if manuscripts and published papers could be checked automatically for errors? That was the premise behind an algorithmic approach we wrote about last week, and today we bring you a Q&A with Jennifer Byrne, the last author of a new paper in PLOS ONE that describes another approach, this one designed to find incorrect nucleotide sequence reagents. Byrne, a scientist at the University of Sydney, has worked with the first author of the paper, Cyril Labbé, and has become a literature watchdog. Their efforts have already led to retractions. She answered several questions about the new paper.

Retraction Watch (RW): Seek & Blastn allows for “semi-automated fact-checking of nucleotide sequence reagents.” Can you explain what these reagents are used for, and what Seek & Blastn does? Continue reading Semi-automated fact-checking for scientific papers? Here’s one method.

A university thought its misconduct investigation was complete. Then a PubPeer comment appeared.

When Venkata Sudheer Kumar Ramadugu, then a postdoc at the University of Michigan, admitted to the university on June 28 of last year that he had committed research misconduct in a paper that appeared in Chemical Communications in 2017, he also “attested that he did not manipulate any data in his other four co-authored publications published while at the University of Michigan.”

And so, a few days later, Michael J. Imperiale, the university’s research integrity officer, wrote a letter to the U.S. Office of Research Integrity (ORI) informing them of the findings. On August 2, Ramadagu was terminated from Michigan. And on August 3, Ayyalusamy Ramamoorthy, the head of the lab where Ramadagu had worked, wrote a letter to Chemical Communications requesting retraction of the paper.

While the retraction would not appear until the end of November, and ORI sanctions not announced until the end of December, Michigan’s responsibilities seemed to have been discharged as of early August. But documents obtained by Retraction Watch through a public records request detail how that was not the end of the story. Continue reading A university thought its misconduct investigation was complete. Then a PubPeer comment appeared.

Journal retracts creationist paper “because it was published in error”

Charles Darwin

It’s become a sort of Retraction Watch Mad Libs: Author writes a paper that is so far, far, out of the mainstream. Maybe it argues that HIV doesn’t cause AIDS. Or that vaccines cause autism. Truth squads swarm over the paper, taking to blogs and Twitter to wonder, in the exasperated tone of those who have been here before, how on earth it was published in a peer reviewed journal.

Then, in something that approaches — but does not quite qualify as — contrition, the journal in question retracts the paper, mumbling something in a retraction notice about a compromised peer review process, or that ghosts in the machine allowed the paper to be published instead of being rejected.

This week’s parade float entry is a paper in the International Journal of Anthropology and Ethnology, a Springer Nature title that is apparently sponsored by The Institute of Ethnology and Anthropology at the Chinese Academy of Social Sciences, where many of its editorial board members work.

Here’s how Jerry Coyne, a researcher at the University of Chicago who keeps an eye on creationists, described the paper, “A brief history of human evolution: challenging Darwin’s claim,” written by Sarah Umer, in a December 18, 2018 post: Continue reading Journal retracts creationist paper “because it was published in error”