Category: ecology

‘Kicking the can down the road’: Science flags insect meta-analysis based on allegedly buggy database

An insect meta-analysis published in Science in 2020 has been hit with an EOC. (Photo credit: Aron Sousa)

Science has issued a permanent expression of concern for a paper reporting a meta-analysis of a database including studies critics have said were “experimentally manipulated.” 

The notice, published today, applies to a 2020 meta-analysis measuring population patterns of freshwater and terrestrial insects and predicting what might drive changes in population numbers. According to the notice, the move comes after critics raised concerns about a database, called InsectChange, on which the meta-analysis was based. The database itself was published in 2021 in Ecology, a journal of the Ecological Society of America. 

The Science article has been cited 820 times, according to Clarivate’s Web of Science. The Ecology paper has been cited 23 times. 

Continue reading ‘Kicking the can down the road’: Science flags insect meta-analysis based on allegedly buggy database

Ecologist who lost thesis awards earns expressions of concern after laptop stolen

Readers may roll their eyes at the various excuses authors use — including flooded labs and “my laptop was stolen” — when their data are unavailable for further scrutiny following questions. But here’s a case in which a stolen laptop is a real story.

On April 5, Daniel Bolnick, the editor-in-chief of The American Naturalist, posted an expression of concern for three studies published in 2018 and 2019:

This Editorial Expression of Concern serves to notify readers of The American Naturalist that the Editorial Board has identified data archiving and statistical concerns regarding three previously published papers. 

The statement continues, noting that author Denon Start — who has had two awards from his PhD rescinded, and whose employment status is unclear — “no longer has access to these data:”

Continue reading Ecologist who lost thesis awards earns expressions of concern after laptop stolen

Majority of journal’s editorial board resigns after publisher’s handling of letter about move to open access

A leading journal in ecology and evolution is going through an evolution of its own, following the resignation of its editor in chief and more than half of its editorial board.

The mass exodus at Diversity & Distributions came after Wiley, which publishes the journal, allegedly blocked it from running a letter protesting the company’s decision to make D & D open access (the company disputes the claim, as we’ll detail in a bit). A letter about the issue, signed by scores of researchers worldwide, decried Wiley’s move: Continue reading Majority of journal’s editorial board resigns after publisher’s handling of letter about move to open access

Journal investigating earlier work by author of discredited fish-microplastics paper 

A biology journal is investigating concerns about a 2014 paper by a marine biologist who was found guilty of misconduct last year.

In December, Uppsala University concluded that Oona Lönnstedt had “fabricated the results” of a controversial 2016 Science paper (now retracted), which examined the harms of human pollution on fish. (Lönnstedt’s supervisor Peter Eklöv was also found guilty of misconduct and had a four-year government grant terminated.) Continue reading Journal investigating earlier work by author of discredited fish-microplastics paper 

Lawyers call libel suit against journal and critic “lawless” but “well written”

Mark Jacobson

A $10 million defamation suit filed by a Stanford University professor against a critic and a journal may be an assault on free speech, according to one lawyer, but at least it’s “well written.”

Kenneth White, a lawyer at Southern California firm Brown White & Osborn who frequently blogs about legal issues related to free speech at Popehat, told us:

It’s not incompetently drafted, but it’s clearly vexatious and intended to silence dissent about an alleged scientist’s peer-reviewed article.

Scientists have publicly bemoaned the suit’s existence, as reported by several outlets, including Mashable and Nature. Mark Jacobson, an engineering professor at Stanford, has alleged that he was defamed in a June article published in the Proceedings of the National Academy of Sciences (PNAS), which was critical of a 2015 paper co-authored by Jacobson in the same journal. In a complaint filed Sept. 29 in the Superior Court of the District of Columbia, Jacobson accused the journal’s publisher, the National Academy of Sciences, and the paper’s first author, Christopher Clack, an executive at a renewable energy analysis firm, of libel.

White told us that there are several pitfalls that could trip up the lawsuit, including a DC law that allows defendants an early opportunity to ask the court to dismiss cases muzzling free speech and recover attorneys’ fees. But another attorney said the complaint should at least clear the lowest hurdle in the way of getting to trial. Continue reading Lawyers call libel suit against journal and critic “lawless” but “well written”

Senior NOAA appointee calls for retraction of paper on illegal fishing

Chris Oliver

A top US official at the National Oceanic and Atmospheric Administration, who was recently appointed by President Donald Trump, has called for the retraction of a paper that suggests the country exports a significant amount of illegal, unreported, and unregulated fishing.

The paper, published July 6 in Marine Policy, estimated that in 2015 approximately one-fifth of Alaska pollock exports to Japan were either illegal, unreported, or unregulated — a value of as much as $75 million.

In an Oct. 11 letter (first reported by IntraFish), Chris Oliver, NOAA assistant administrator for fisheries, criticized the paper’s methodology for calculating the illegal hauls.

Oliver wrote to the journal’s editor-in-chief to say that the National Marine Fisheries Service: Continue reading Senior NOAA appointee calls for retraction of paper on illegal fishing

Lost citation snuffs out Aussie fire paper

A journal has retracted a 2016 paper on wildfires in Australia because the authors neglected to cite earlier work — an unintentional lapse, they said.

The article, “Projected changes in Australian fire regimes during the 21st century and consequences for Ecosystems,” appeared in the International Journal of Wildland Fire. The authors are Sandy Harrison and Douglas Kelley,  of the University of Reading, in the UK. Kelley appears to have done his share of the work as a PhD student at Macquarie University in Australia.

According to the notice: Continue reading Lost citation snuffs out Aussie fire paper

Are there foxes in Tasmania? Follow the poop

Stephen Sarre, based at the University of Canberra in Australia, has made a career out of collecting and analyzing poop.

It’s a tough job, but someone’s got to do it. Part of his work is designed to answer a multi-million dollar question: Is Tasmania home to foxes, a pest that carries rabies and other diseases and can ravage local wildlife? According to the Australian news outlet ABC, the Tasmanian and Australian governments have spent $50 million (AUD) on hunting foxes on the island since 2001 — even though many have debated whether they are even there.

In 2012, after analyzing thousands of fecal samples, Sarre published a paper in the Journal of Applied Ecology which boldly claimed that “Foxes are now widespread in Tasmania.” But many outside researchers didn’t buy it, and quickly voiced their criticisms of the paper, namely that there may be problems with false positives and the methodology used to analyze the samples. Recently, the journal issued an expression of concern for the paper, citing an ongoing investigation into the allegations.

Here’s the expression of concern (paywalled, tsk tsk):

Continue reading Are there foxes in Tasmania? Follow the poop

Career derailed, ex-prof to sue Montana State for wrongful termination

Ryan Jones. Credit: Kelly Gorham/MSU

A former assistant professor at Montana State University who was fired last year is planning to sue the school for defamation, wrongful termination, and violation of due process.

Ryan Jones, a microbiologist, was forced to leave his tenure-track position — which was technically a one-year contract, so could be terminated before he had the opportunity to apply for tenure. The case highlights the insecurity of non-tenured academic jobs, an issue the planned suit is tackling head on. In addition to monetary damages, the lawsuit seeks to void all one-year contracts at Montana State, which can be terminated for any reason — a system that exists elsewhere in academia.

Jones told Retraction Watch that he believes he was forced out based on what he alleges are cooked-up charges of research misconduct — specifically, he brought back insect samples from the Amazon but didn’t fill out a permit:

Continue reading Career derailed, ex-prof to sue Montana State for wrongful termination

Ex-PhD candidate sues advisor, school: Colorado prof “poisoned the well” after research dispute

A former University of Colorado Boulder graduate student is suing his ex-advisor for defamation after being shooed out midway through his doctoral program.

Robert Roscow says he had to leave CU Boulder’s department of Ecology and Evolutionary Biology (EBIO) in the fall of 2016 with only a master’s degree after fish evolution researcher David Stock dropped him as a student. Their relationship deteriorated following a dispute about whether another student should perform experiments Roscow considered to be essential to his dissertation.

Once dropped, Roscow was offered the chance to find another advisor, but never did. In his complaint, filed April 25 in Boulder County District Court, Roscow claims he has evidence that Stock “poisoned the well” by badmouthing him in email and in person to other professors, ultimately preventing Roscow from completing his degree.

As first reported by BusinessDen, Roscow is also suing CU Boulder for a breach of contract and for failing to “provide [him] with the reasonable opportunity to pursue his PhD,” among other allegations. 

CU Boulder declined to elaborate on the case. Chief Spokesperson Ryan Huff told us:

Continue reading Ex-PhD candidate sues advisor, school: Colorado prof “poisoned the well” after research dispute