20 ways to spot the work of paper mills

via Pixy

Last year, Naunyn-Schmiedeberg’s Archives of Pharmacology found itself on the receiving end of what its editor Roland Seifert called a “massive attack of fraudulent papers” that were the product of paper mills. 

In response Seifert — who says the journal ultimately will have retracted 10 of those articles and stopped another 30 from being published — has produced a 20-point list of red flags that indicate the possibility of a paper mill in action, and features of these papers in general.

We won’t reproduce the list in its entirety, but here are a few highlights, in no particular order. 

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Okinawa researcher suspended for faking data denies committing misconduct

Okinawa Institute of Science and Technology Graduate University (OIST)

Ye Zhang, who as we reported yesterday is serving a six-month suspension from her post at Okinawa Institute of Science and Technology Graduate University (OIST), in Japan, says she did not commit misconduct, as the school contends. 

In response to a query from Retraction Watch, Zhang, a materials scientist, said she did not agree with the findings of an OIST investigation that found she fabricated data and plagiarized in a May 2019 paper in Chemical Communications. (A spokesman for the publisher told us that the journal only recently learned about the OIST report and is looking into the matter.)

In a lengthy email protesting her innocence, Zhang told us: 

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Springer Nature to retract chapter on sign language critics call “unbelievably insulting”

Julie Hochgesang

Springer Nature is retracting a book chapter describing conference research after scholars in the deaf community blasted it for being “unbelievably insulting.”

The chapter, “Implementation of Hand Gesture Recognition System To Aid Deaf-Dumb People,” appeared in Advances in Signal and Data Procesing: Select Proceedings of ICSDP 2019. The authors were  Supriya Ghule and Mrunalini Chavaan, of the MIT Academy of Engineering in Pune, India. 

According to the abstract

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A tale of three journals: Paper retracted when associate editor submits to the wrong title

What a difference a D makes. 

Ask Kevin Pile. Pile edits the International Journal of Rheumatic Diseases (let’s call it the IJRD), a Wiley publication. Last year, he published a guest editorial by Vaidehi Chowdhary, a rheumatologist at Yale University in New Haven, Conn., on a form of kidney disease. 

But it turns out that Chowdhary, a member of Pile’s editorial team, had intended to submit her article, “When doing the right thing is wrong: Drug efflux pumps in steroid‐resistant nephrotic syndrome,” to a different journal, the Indian Journal of Rheumatology, or IJR. We think you can see how this all went down. 

According to Pile, the episode was “a tail of consecutive mistakes”:

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The mill and the loss: Journal up to 39 retractions, just under half linked to paper mills

An abandoned paper mill, via Flickr

We’re rounding out the week with a third post about paper mills: A Taylor & Francis journal is up to 39 retractions, 18 of which appear to have been the work of at least one such operation.

Last March, The publication, “Artificial Cells, Nanomedicine, and Biotechnology,” issued an expression of concern for 13 of the articles, after a group of data sleuths pointed out problems with the papers. 

As Science magazine pointed out at the time, the sleuths, including Elisabeth Bik, found evidence that more than 400 articles generated by the suspected mill contained fabricated images. All of the papers came from research teams based in China, they noted. 

Continue reading The mill and the loss: Journal up to 39 retractions, just under half linked to paper mills

NIH researcher responds as sleuths scrutinize high-profile study of ultra-processed foods and weight gain

via Hall et al, Cell Metabolism

[This post has been updated since publication; see update note at end for details.]

In July 2019, Kevin Hall, of the U.S. National Institutes of Health, and colleagues published a study in Cell Metabolism that found, according to its title, that “Ultra-Processed Diets Cause Excess Calorie Intake and Weight Gain.” 

A year and a half after its publication, the paper is the subject of two critical blog posts, one by Nick Brown and one by Ethan and Sarah Ludwin-Peery. In the days since we first shared embargoed drafts of those posts with Hall, he and the sleuths engaged in a back and forth, and Brown and the Ludwin-Peerys now say they are satisfied that many of the major issues appear to have been resolved. They have also made changes to their posts, including adding responses from Hall.

In short, it seems like a great example of public post-publication peer review in action. For example, the Ludwin-Peerys write:

When we took a close look at these data, we originally found a number of patterns that we were unable to explain. Having communicated with the authors, we now think that while there are some strange choices in their analysis, most of these patterns can be explained…

In a draft of their post shared with us early last week — see “a note to readers” below — the Ludwin-Peerys said that some of the data in the study “really bothered” them. In particular, they write, the two groups of people studied — 20 received ultra-processed foods, while 20 were given an unprocessed diet — “report the same amount of change in body weight, the only difference being that one group gained weight and the other group lost it.” They were also surprised by the “pretty huge” correlation between weight changes and energy intake.

Brown’s draft post, which digs into the data, concludes:

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Why one biologist says it’s not too late to retract the “arsenic life” paper

David Sanders

An anniversary has prompted this reconsideration of the revolution in biochemistry that wasn’t: the “arsenic bacteria.” Just over 10 years have passed since an infamous Dec. 2, 2010, NASA press conference, which promised the revelation of “an astrobiology finding that will impact the search for evidence of extraterrestrial life.” 

Of course, nothing of the kind occurred. The carefully curated moment was less informative for its scientific value — in effect, nil — than for what it says about how years of attention-seeking and speculation in biology can drive an agenda. Equally concerning, despite the intervening decade in which other researchers debunked the overhyped result, is that the journal involved has yet to retract the article in question, allowing it to live in a zombie state.   

The announcement at the press conference was, to the disappointment of many, the supposed “discovery” of a microbe that could grow on arsenate in the absence of phosphate and incorporate arsenic instead of phosphorus in macromolecules such as nucleic acids and proteins that was being published in ScienceSteven Benner (referring to himself as a curmudgeon) was the only individual at the press conference who talked real sense by undermining the claims.   Mary Voytek, NASA Senior Scientist for Astrobiology (a position she still occupies) employed a Star Trek analogy:

Continue reading Why one biologist says it’s not too late to retract the “arsenic life” paper

Publisher retracting 68 articles suspected of being paper mill products

via Pixy

It appears to be Paper Mill Sweeps Week here at Retraction Watch. 

On Tuesday, we reported on an editor who believes one such operation was responsible for the withdrawals of at least two articles in her journal. 

Now, the Royal Society of Chemistry is retracting 68 articles, across three of its titles, after an investigation turned up evidence of what it suspects was the “systemic production of falsified research.” The society said it is in the process of beefing up its safeguards against milled papers and plans to train its editors to have “extra vigilance in the face of emerging, sophisticated digital fraud.” 

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‘Striking’: Journal editor suspects paper mills behind rash of withdrawn manuscripts

Carol Shoshkes Reiss

Carol Shoshkes Reiss describes it as “especially striking.”

I have been Editor-in-Chief of DNA and Cell Biology for the last decade.  It has been rare for authors to request withdrawal of a paper they have submitted.  However, in the last two weeks, six papers have been withdrawn on request.

What really puzzled Reiss, a professor emerita at New York University, was that two of the withdrawals used identical language — down to the incorrect punctuation and stilted phrasing:

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“This retraction is one of the fastest I ever experienced after reporting a paper to a journal editor.”

Elisabeth Bik

A researcher who has had more than 40 papers questioned by scientific sleuths has lost a second to retraction.

On December 14, Elisabeth Bik reported problems in 39 papers coauthored by Hua Tang, of Tianjin Medical University in China, to the editors of the journals that had published the papers. PubPeer commenters found problems in several other papers, and Bik tallied the 45 articles in a December 18 post.

In May, Tang lost a paper from PLOS ONE that Bik had flagged for the journal all the way back in 2015 — a delay that is not unusual for the journal, but becoming less common.

But the response this time was swift, at least for one journal. DNA and Cell Biology, a Mary Ann Liebert title, retracted “microRNA-34a-Upregulated Retinoic Acid-Inducible Gene-I Promotes Apoptosis and Delays Cell Cycle Transition in Cervical Cancer Cells” this week. (The exact date of the retraction is unclear, as Bik notes below.)

Here’s the notice:

Continue reading “This retraction is one of the fastest I ever experienced after reporting a paper to a journal editor.”